Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc275g00001 ATGGCATCCAGCAGCAGCAGGGGTGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAGCAGATTGTCAATGCTGCAAAGAATGAAAAATTGGCTAGGCTGAAACAGGCCAAAGATGAGGCTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGAGTATCAGTTTCAGCAGAAACTTTCGGAGAGTAGCGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAAACTGATTCAAAGATCCATCACCTGAAATCCGAGTCTTCAAGAATATCAGGGGATGTTGTCAGCATGCTCCTCAGTTATGTAACAACTGTGAAAAATTAA 342 0.4444 MASSSSRGGQGGIQQLLAAEQEAQQIVNAAKNEKLARLKQAKDEAEKEIAEHRAQLEYQFQQKLSESSGDSGANVKRLEQETDSKIHHLKSESSRISGDVVSMLLSYVTTVKN 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc275g00001 113 NCBIfam V-type ATPase subunit G 11 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc275g00001 113 Coils Coil 13 62 - -
Stsc275g00001 113 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 7 113 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc275g00001 113 Gene3D - 3 113 - -
Stsc275g00001 113 Pfam Vacuolar (H+)-ATPase G subunit 10 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc275g00001 113 FunFam V-type proton ATPase subunit G 6 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc275g00001 Stsc-Chr275 1415 3589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc275g00001 11 113 Primary Pumps ATPases(2) AT4G23710 69.903 8.31e-47 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc275g00001 K02152 - gmx:100305477 171.785