Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc275435g00001 ATGGCTGAAGAAATTGAAGGATCTCCCGGAAGCTCCATGCATGGAGTAACCGGAAGAGAACAAACCTTCATATCCTCAGTCTCTTCCCCAATGGTCCCCACCGACACCACGGCGAACTTCGCCTTGCCGGTGGATTCAGAGCACAAGGCCAAAGTCTTCAAGCTCTTCTCCTTAGCAAACCCTCACATGAGAACCTTCCACTTGTCCTGGATCTCATTCTTTACTTGCTTCGTCTCCACCTTCGCCGCCGCTCCCCTCGTCCCGATAATTCGGGACAACCTAAACTTGACGAAGGTAGACATCGGCAACGCCGGGGTCGCCTCCGTCTCCGGAAGCATATTCTCTAGGCTGACAATGGGAGCCGTATGCGACCTTTTAGGGCCCCGATACGGCTGCGCGTTCCTTATCATGCTAACCGCACCGACAGTATTCTGCATGTCGTTTGTCAACGACGCTGCAGGATACATAGCGGTGCGGTTCATGATAGGGTTTTCGCTGGCGACGTTCGTGTCGTGCCAGTATTGGATGAGCACAATGTTTAATAGCAAGATCATAGGGCTTGTGAATGGAACGGCGGCGGGGTGGGGGAACATGGGTGGAGGAGCCACCCAGTTGATAATGCCGTTGGTTTATGAGGTTATTAGGAGAGCAGGGTCAACGCCATTCACAGCATGGAGGATTGCTTTCTTTATACCTGGTTTCTTGCATGTTATCATGGGGATCTTGGTGTTAACACTAGGACAAGATTTGCCTGATGGTAACCTTGGTGCCCTTCAAAAGAAGGGAAATGTTTCCAAAGACAAATTCTCCAAGGTGTTGTGGTATGCCATAACCAATTACAGGACATGGATCTTTGCCCTTCTCTATGGTTACTCCATGGGAGTTGAACTTACCACTGACAACGTTA 907 0.5039 MAEEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTANFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYEVIRRAGSTPFTAWRIAFFIPGFLHVIMGILVLTLGQDLPDGNLGALQKKGNVSKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc275435g00001 302 SUPERFAMILY MFS general substrate transporter 60 296 IPR036259 -
Stsc275435g00001 302 Gene3D MFS general substrate transporter like domains 59 254 IPR036259 -
Stsc275435g00001 302 FunFam High affinity nitrate transporter 58 255 - -
Stsc275435g00001 302 Pfam Major Facilitator Superfamily 70 294 IPR011701 GO:0022857|GO:0055085
Stsc275435g00001 302 ProSiteProfiles Major facilitator superfamily (MFS) profile. 65 302 IPR020846 GO:0022857
Stsc275435g00001 302 CDD MFS_NRT2_like 66 302 IPR044772 GO:0015112
Stsc275435g00001 302 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 4 302 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc275435g00001 Stsc-Chr275435 1 945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc275435g00001 7 302 Inorganic Solute Cotransporters AT5G60770 82.432 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc275435g00001 K02575 - gmx:100807710 586.645