Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc275388g00002 | ATGCTAATGGGCATATGGGGGATGGCGGGAGTAGGTAAAACAACCATTGCCAAAGCTGTTTACAATCATGTTCGTCACAATTTTGATAGTGCATTGTTCCTCCCAAACATTAGGGAGATGTGGAAGAATAACAAACAAATTTTTCTGCAAGAACAAGTGTTGAATCGTATTTGCAAGGCAGGGATAAACATACAAAACATTGCATCAGGGGTAGCTGAATTAAAGCAAAGACTTCCCCAAAAAAGGGTATTTATTGTACTCGATGATGTAGATAAGATAGATCAGCTGGAAGCCTTGTGCGGAAGTCGAGGATGGTTTGGTGCAGGGAGTAGAATAATCATCACAGCAAGAGATAGACGTCTGCTTCGAATGAAAGAAGTTGATCACGACTACCAAGTGGAACAAATGAATAACCATGAGTCCCTTGAACTTTTTAGTTGGAATGCATTTAATCATCCAACTCCTTCAGTACAGTTTTCTAGACTTGCACTTGAAACAGTTAAAAATTGCGAGGGGATGCCATCAGCCATTGTAACAGTTGGTCGTGAATTGTTTGGAAAGACGAAACTAGTTGAGTGGGAGAATGTAATAGAAGAACTCAAAGCTTTTTCCCGTCAGCAAGGATACGAAGCCTTGAAAATAAGCTATGATAGCTTAAATGAAGATAGAAAGAAAGAGATATTTCTTAATATAGCTAGCTTTTGTATTGGCATGGAAAGAGAGGAGGTACTGCAAACTCTAAGGGAAGCCTTTGATATTCCACTTGAGAATATTAGTTTCCTTGGACAGCGTGGTCTTATAACATTTGATCAACAAGGCAGAGTTCAAATGCATCATTTGTTGCAAGAGATGGCAAGAGAAATCCTTCGAGAGCTATCACAAACTCAGGCTCAGAGCACGCCGCAACTAGCTAAAAGAGAAATTAAGCCGGTGTCTATGCGCAGCAAAAATCCGACACCATTTCCCACCGAGAATTAA | 978 | 0.4018 | MLMGIWGMAGVGKTTIAKAVYNHVRHNFDSALFLPNIREMWKNNKQIFLQEQVLNRICKAGINIQNIASGVAELKQRLPQKRVFIVLDDVDKIDQLEALCGSRGWFGAGSRIIITARDRRLLRMKEVDHDYQVEQMNNHESLELFSWNAFNHPTPSVQFSRLALETVKNCEGMPSAIVTVGRELFGKTKLVEWENVIEELKAFSRQQGYEALKISYDSLNEDRKKEIFLNIASFCIGMEREEVLQTLREAFDIPLENISFLGQRGLITFDQQGRVQMHHLLQEMAREILRELSQTQAQSTPQLAKREIKPVSMRSKNPTPFPTEN | 325 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc275388g00002 | 325 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 229 | IPR027417 | - | |
Stsc275388g00002 | 325 | Gene3D | - | 1 | 130 | IPR027417 | - | |
Stsc275388g00002 | 325 | SUPERFAMILY | "Winged helix" DNA-binding domain | 210 | 293 | IPR036390 | - | |
Stsc275388g00002 | 325 | PRINTS | Disease resistance protein signature | 77 | 91 | - | - | |
Stsc275388g00002 | 325 | PRINTS | Disease resistance protein signature | 170 | 184 | - | - | |
Stsc275388g00002 | 325 | PRINTS | Disease resistance protein signature | 2 | 17 | - | - | |
Stsc275388g00002 | 325 | Pfam | NB-ARC domain | 2 | 206 | IPR002182 | GO:0043531 | |
Stsc275388g00002 | 325 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 3 | 298 | IPR044974 | GO:0006952 | |
Stsc275388g00002 | 325 | Gene3D | - | 135 | 220 | IPR042197 | - | |
Stsc275388g00002 | 325 | MobiDBLite | consensus disorder prediction | 295 | 325 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc275388g00002 | Stsc-Chr275388 | 1690 | 2825 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc275388g00002 | 3 | 299 | WRKY Transcription Factor Family | AT5G45050 | 35.786 | 2.31e-48 | 172 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc275388g00002 | - | - | ahf:112727946 | 380.178 |