Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc275136g00001 ATGGATTTGTTTGGTTCAAATGGAAATGACCATGAGGATTCTCTGCCGCCGCCACCACCAGTCCCACCCGATGTTGTTCCGGCCAAAGCAGAGCAGGAACTCCCCCCTGAGCCGCCAAAGAAAACCCGGGTGCCAATTGCCAGGCGTGGTCTAGGTTCAAAGGGTCAGAAGCTGACTCTGATGACCAATCACTTCAAAGTGAATGTGAACAACACTGAAGAGGAATTCTACCAGTATAGTGTGGCACTTTCTTACGAAGATGGTCGCCCTGTGGAAGGAAAGGGTGCTGGAAGGAAAGTGATAGACAAAGTGAAGGAAACTTATGACTCTGAGTTGAATGGGAAGGACCTTGCCTATGATGGTGAAAAAACTTTGTTCACTGTTGGGTCTCTAGCTCGGAACAAGCTTGAGTTTACTGTAGTTCTTGAGGATGTTACCCCAAGCAGAAATAATGGAAACTGCAGCCCTGATGGTCATGGAAGTCCCAATGAAAATGATAGGAAGAGGATGAGGCGCCCGTACCGCGCCAAAACTTTTAAAGTGGAGATTAGCTATGCCAATAAAATTCCAATGAAAGCCATTACCAATGCTATTCGTGGCCAGGAAACTGAGAATTATCAAGAAGCCATCCGA 633 0.4692 MDLFGSNGNDHEDSLPPPPPVPPDVVPAKAEQELPPEPPKKTRVPIARRGLGSKGQKLTLMTNHFKVNVNNTEEEFYQYSVALSYEDGRPVEGKGAGRKVIDKVKETYDSELNGKDLAYDGEKTLFTVGSLARNKLEFTVVLEDVTPSRNNGNCSPDGHGSPNENDRKRMRRPYRAKTFKVEISYANKIPMKAITNAIRGQETENYQEAIR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc275136g00001 211 MobiDBLite consensus disorder prediction 146 160 - -
Stsc275136g00001 211 Pfam N-terminal domain of argonaute 57 211 IPR032474 -
Stsc275136g00001 211 MobiDBLite consensus disorder prediction 146 173 - -
Stsc275136g00001 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 37 209 - -
Stsc275136g00001 211 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc275136g00001 Stsc-Chr275136 3 1165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc275136g00001 48 211 Eukaryotic Initiation Factors Gene Family AT5G43810 26.667 5.96e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc275136g00001 K11593 - qsa:O6P43_014615 300.827