Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274g00008 ATGGCCATTTCTTTTAACACACCTCTTTCCTTCAGCTTCCTCACACAACTACCTTCCTCCACCCGACCATCCTCATTCCCCCTTTCTAATTTAACCCTAAATTCACCCTCACTCAACCATAATCATGTTAGGTTCCAGTTCCCTCCAGCAACGAAGCTTCCCAGCATCAACTGCGATTACACCACTTTTGAAGTTAGAGATGTTAGCTATCAGCCTCCGGGGACTCAGCTCAAGCTACTGAATTCAGTTAGTTTCTCACTTCCGGAGAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGTGGGAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAAGCAAACCGACCACTGGGTCCATTTACAGCCAAAAGTATGGAAATGATGGAAATCCCATCGAACCTCCCGAGCCCTTGTCACCAGAAAGAGTTGGTATTGTCTTCCAGTTCCCTGAGAGGTATTTTTTAGCTGAAAATGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAGCTATCAATTGAGAGAAAATCTTGCTTTAGGGCTTCAAAGGGCTATTAACTGGGTTGGATTGAATGGGATATCATTGGATAAAAATCCTCACTCCCTTAGTGGTGGTTACAAACGTCGCCTTGCTTTGGCAATTCAATTAGTACAAATCCCTGATCTATTGATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTTTAAAGCATCTAAAAAAGGAGTTGACTGTGCTTGTTGTCAGCCATGACTTGAGG 795 0.4377 MAISFNTPLSFSFLTQLPSSTRPSSFPLSNLTLNSPSLNHNHVRFQFPPATKLPSINCDYTTFEVRDVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTTGSIYSQKYGNDGNPIEPPEPLSPERVGIVFQFPERYFLAENVLDEVTFGWPRQKGSYQLRENLALGLQRAINWVGLNGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274g00008 265 PANTHER HEAVY METAL TRANSPORTER 64 264 - -
Stsc274g00008 265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 63 264 IPR003439 GO:0005524
Stsc274g00008 265 Gene3D - 55 265 IPR027417 -
Stsc274g00008 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 264 IPR027417 -
Stsc274g00008 265 FunFam ABC transporter I family member 11 chloroplastic 52 265 - -
Stsc274g00008 265 Pfam ABC transporter 80 233 IPR003439 GO:0005524
Stsc274g00008 265 CDD ABC_cobalt_CbiO_domain1 64 264 IPR015856 GO:0005524|GO:0016020|GO:0055085
Stsc274g00008 265 SMART AAA_5 89 264 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274g00008 Stsc-Chr274 57088 59895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274g00008 67 264 Calmodulin-binding Proteins AT2G36910 25.714 8.77e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274g00008 - - vun:114196181 384.03