Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274g00005 ATGTTGTTCCCTTGTCCTCCTTCTTCTTCTTCTACCTCTTCCTACCACATAGGAATCTCTAACACTCCTACTACTCCCCAGCATGCTTTCATTACTGCTTTGAATAATAATAACAACAACGACGCATTTCTGGATTTGAAGTTTCATCATCATCAGCAGCAGCAGCAGTTATTGAAGAGAACATCAGAAGAAGAAGATCATCATCAACAACAAGAAGAAGATGAAGCGATGAATAATAATAATGCGGGGGTTAATGTAAGTGATGATCATCATGAATTAGGTGGTGGTTCTTCATCAACATCGAATAACAATAACAAGAAGAAAGGGGAGAAGAAAGTTAGGAAACCAAGATACGCTTTTCAAACGAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAAAACAACAAATTCCCAAGGAGCTACTACAGGTGCACACATCAAGGGTGCAACGTGAAGAAGCAAGTCCAACGTCTTACGAAAGATGAGGGTGTAGTGGTGACCACCTACGAAGGAGTGCACACTCACCCTATTGAGAAAACTACCGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 627 0.4051 MLFPCPPSSSSTSSYHIGISNTPTTPQHAFITALNNNNNNDAFLDLKFHHHQQQQQLLKRTSEEEDHHQQQEEDEAMNNNNAGVNVSDDHHELGGGSSSTSNNNNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274g00005 208 MobiDBLite consensus disorder prediction 56 74 - -
Stsc274g00005 208 MobiDBLite consensus disorder prediction 1 20 - -
Stsc274g00005 208 FunFam WRKY transcription factor 57 115 189 - -
Stsc274g00005 208 SUPERFAMILY WRKY DNA-binding domain 121 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc274g00005 208 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc274g00005 208 MobiDBLite consensus disorder prediction 75 104 - -
Stsc274g00005 208 Gene3D WRKY domain 113 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc274g00005 208 MobiDBLite consensus disorder prediction 50 117 - -
Stsc274g00005 208 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 191 IPR044810 GO:0003700
Stsc274g00005 208 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc274g00005 208 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274g00005 Stsc-Chr274 24864 28369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274g00005 117 208 WRKY Transcription Factor Family AT5G13080 88.043 5.92e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc274g00005 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274g00005 - - aip:107648396 251.521