Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274840g00001 ATGCCTGAATTGGATGAGGACCACATGATGGCGAAAGATTTGAACGCATTTGATTTGATTTCTTTCTCATCCGGGTTTGACATTTCGGGTTTGTTGACCCACTCGGAGTATTTGAATTGCGTGGAGCGGTTTGTGTCGAAAGAGAAGCCAGAAAAGATATTGGAGAGGGTGAAAGCGATGGTGGATAAAGTGGAGAGGGTGGTAGTGAGAAAAGACGAAAAGGCCTGTGAAGGAGTGAAGTTGGAGGGTTTAGATGGTAATTTTGTAATTGCTGTTAGGATTTATCGGTTAATGAATGAATTGGTGGTTATTGAGGTAAAAAGAAAAGAGAAGAAAGTGGGAGGTGGACAATTTTGGAGGACTCAGTTGAGACCTTTGCTTCTTGAATTGGCTCTTCTTCATGGAAATGCTTCCAAATAA 420 0.4167 MPELDEDHMMAKDLNAFDLISFSSGFDISGLLTHSEYLNCVERFVSKEKPEKILERVKAMVDKVERVVVRKDEKACEGVKLEGLDGNFVIAVRIYRLMNELVVIEVKRKEKKVGGGQFWRTQLRPLLLELALLHGNASK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274840g00001 139 ProSiteProfiles NAF domain profile. 9 33 IPR018451 GO:0007165
Stsc274840g00001 139 Pfam NAF domain 13 70 IPR004041 GO:0007165
Stsc274840g00001 139 Gene3D Kinase associated domain 1, KA1 9 131 - -
Stsc274840g00001 139 CDD CIPK_C 15 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274840g00001 Stsc-Chr274840 2793 3240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274840g00001 6 130 CBL-interacting serine-threonine protein kinases AT5G01820 38.889 1.91e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274840g00001 - K12761 gmx:100788245 92.4337