Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274799g00001 ATGGATGATGAAGTTATTCAGCGAGTGTTCCACGAAGGAGGACGCGATTTCTTCCAGCAGCAACCTTCTTCAACTTCCTCCATCCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTACTGGTAAAATCGGTCCAAGAACTACGGGAGAAAAAGGAAGGCCTTGTTACAGTTGGAATTGGTGGTCCTAGTGGCTCTGGAAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGCACTGTGATATCAATGGAGAATTATCGTGATGGAGTTGATGAAGGGAGTGATCTGGATTTTATAGATTTCACTAGCTTGATCAAGAATCTTGAGGATTTGATAAAAGGTGATGATACATTAGTCCCAGTGTTTGATTATCAACAAAAGAGACGTGTTGGCTATAAAGCCATAAAGAGTACTGCATCTGGGGTGGTAATAGTTGATGGAACGTATGCATTACATGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGTCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATAGCCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCACGCACAGATCAGAATTAACAACAGCTTTGTATCATCATTTAGAGAGGCAATCTACAAGCTTAAATGCAGAAGTGAG 720 0.4028 MDDEVIQRVFHEGGRDFFQQQPSSTSSILQSLPLHVSFDHGYYLLVKSVQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRDGVDEGSDLDFIDFTSLIKNLEDLIKGDDTLVPVFDYQQKRRVGYKAIKSTASGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDSLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKLKCRSE 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274799g00001 240 PANTHER URIDINE KINASE 13 219 - -
Stsc274799g00001 240 CDD UMPK_like 61 223 - -
Stsc274799g00001 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 173 IPR027417 -
Stsc274799g00001 240 Gene3D - 60 237 IPR027417 -
Stsc274799g00001 240 Pfam Phosphoribulokinase / Uridine kinase family 106 221 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274799g00001 Stsc-Chr274799 2817 4878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274799g00001 62 220 PRT Gene Family AT1G55810 21.348 4.44e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274799g00001 - - qlo:115972952 422.55