Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274741g00001 ATGAATGCAGGGAAGGTATTCGTGTATTGGCTGGGCACAGAACCATTCTTGTACATTGCGGACGCAGACTTGTTGAACAAAATCTCCAAGGAGGTGGGGGCTAAGAGATGGGGAAAGCCAAGTGTGTTTAGAAATGACAGAGATCCCATGTTTGGTAGTGGCTTGGTCATGGTTGAAGGCAACGATTGGGTTCGCCATCGCCACATTGTTGCACCTGCATTCAATCCCATTAATCTCAAGGCCTTGGCTACCAACATCGTTGCATCAACAAACAAAATGATACAAAGATGGATCTTCCAACATAACTCCGGCAACCCCGTCATCGACGTTGAGAGGGACATTGTAGCCACCGCAGGAGAGATCATAGCAGTAACCAGCCTCGGCATGGATGATCACAACGCCGCCACACAAGTCTTTCAAAAATTGCGAGCTCTTCAGATCACACTCTTCAACACCAACCGCTACGTTGGGGTTCCATTCGGCAAGTATTTCAAGTTCTTTAAAACCCTAGAGGCCAAGAAATTAGGCAAAGAAATTGACGAGCTCTTGTTGTCTATCATTCAAGCTCGCATGAGCAACAATTCATCCAAAAGCAAGGGTTCCCAGCAGAGCGATTTGCTGGGTTTGTTGCTTCAAGAAAATGATTGGCAGAAGCAACTGAGAGATGAGATTCAACAAGTTCTTGCTCAACACAAGCACGTTATTGACCTCGCCATGCTTTCAGGTTTAACCAAGATGAAGTGGGTGATGAATGAAGCCTTAAGGCTGTACCCTCCGTCACCAAATGTGCAAAGGCAAGCAAGAGACGACATTCACATTGAGGGTTTGACGGTCCCTAAAGGAACCAACATGTGGATCGACGTGGTTGGCATGCACCATGACAAGGAGCTGTGGGGAGAGGATGCGAATGAGTTCAAGCCGGAGAGATTCATGGAAGATGTGAATGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACATTCATGGAGTACAAGATTGTGTTAACACTTGTTCTCTCTAAATTCTCTTTCAAACTTTCTCCTTCTTACCATCACTCGCCCTCTATCATGCTCTCTCTAAGGCCCACCCATGGACTCCCACTCGTACTTCAACCACTTTAG 1161 0.4643 MNAGKVFVYWLGTEPFLYIADADLLNKISKEVGAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKALATNIVASTNKMIQRWIFQHNSGNPVIDVERDIVATAGEIIAVTSLGMDDHNAATQVFQKLRALQITLFNTNRYVGVPFGKYFKFFKTLEAKKLGKEIDELLLSIIQARMSNNSSKSKGSQQSDLLGLLLQENDWQKQLRDEIQQVLAQHKHVIDLAMLSGLTKMKWVMNEALRLYPPSPNVQRQARDDIHIEGLTVPKGTNMWIDVVGMHHDKELWGEDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLVLSKFSFKLSPSYHHSPSIMLSLRPTHGLPLVLQPL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274741g00001 386 PRINTS E-class P450 group I signature 334 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS E-class P450 group I signature 324 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS E-class P450 group I signature 288 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS E-class P450 group I signature 203 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 Pfam Cytochrome P450 4 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 Pfam Cytochrome P450 207 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Stsc274741g00001 386 Gene3D Cytochrome P450 2 210 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 Gene3D Cytochrome P450 211 386 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS P450 superfamily signature 212 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PRINTS P450 superfamily signature 248 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274741g00001 386 PANTHER CYTOCHROME P450 FAMILY MEMBER 209 378 - -
Stsc274741g00001 386 SUPERFAMILY Cytochrome P450 4 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274741g00001 Stsc-Chr274741 4101 5481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274741g00001 4 386 Cytochrome P450 AT5G52400 54.481 5.24e-165 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274741g00001 - - gmx:100785284 560.836