Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274718g00001 CAAAAGGGTGAGTTGGAGAAGGATCAATTGGAAATAGTTAATAGCCTTACACAGATCCAGAATTGGAGTGAAGCAGCGAGTGAATGGCAAAGAGTCCAGGAGAAGATTCAAAACATGTCAGGGGTGGCTACTTTGTTTGACTACACAAAGAAAGATCAAACTGTTAACTATGAAGATTGGATTACTCAATTCTTGAACACGGATGAGGTGAAGAAGGTACTGGGAGTGAACGAATCTCGGGTGTTTAAAGCTACCAGCAGTGAGGTAAGGACAGCGTTGCAGGGTGATATAATGAAGAGTGTCAAGTTTAGGGTAGAGGAGTTGTTGAGGATCAACACTACTAGGGTGTTGATATACCAAGGTCAATATGATTTGCTTGCTGGTCCAGTGCAAACTGATGCGTGGGTGAAGACTATGAAATGGGAAGGGATTGAGGAGTATCTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACCAATGTTATGGTGTTAGGAGCTGGCCATATTATGCCTGCTGACCAGCCTGTTAATGCTCAGGCAATGATACAAGATTGGGTCTTGCAAAGGAGTTTGTCTGAAAATGTGTAA 627 0.4338 QKGELEKDQLEIVNSLTQIQNWSEAASEWQRVQEKIQNMSGVATLFDYTKKDQTVNYEDWITQFLNTDEVKKVLGVNESRVFKATSSEVRTALQGDIMKSVKFRVEELLRINTTRVLIYQGQYDLLAGPVQTDAWVKTMKWEGIEEYLNAERKIWKVNGELAGYVQQWKSLTNVMVLGAGHIMPADQPVNAQAMIQDWVLQRSLSENV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274718g00001 208 Pfam Serine carboxypeptidase 46 200 IPR001563 GO:0004185|GO:0006508
Stsc274718g00001 208 Gene3D alpha/beta hydrolase 3 207 IPR029058 -
Stsc274718g00001 208 SUPERFAMILY alpha/beta-Hydrolases 17 200 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274718g00001 Stsc-Chr274718 63 689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274718g00001 66 204 Calmodulin-binding Proteins AT2G22960 23.571 3.77e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274718g00001 K09645 - gmx:100780822 247.669