Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274626g00001 AAAATGAGGAATCTTCTTGAAGAGTTTAACACTGATCATGGGCTTCGTCGACCAACCATACTTGGTATTAGGGAACATGTATTTACTGGAAGTGTCTCATCATTGGCCTCCTTTATGTCCAACCAAGAAACTAGTTTTGTGACTTTGGGTCAGCGTGTTTTAGCAAATCCTTTGAAGGTTCGTATGCATTATGGTCATCCTGATGTCTTCGATAGAATCTTCCACATAACTCGTGGTGGTATTAGCAAGGCTTCTCGTGTTATAAACATAAGTGAAGATATCTACGCAGGATTCAATTCTACTTTGCGTCAAGGAAATGTTACCCATCATGAATATATTCAGGTCGGCAAGGGAAGGGATGTTGGACTCAATCAGATTGCAGTATTTGAAGGGAAAGTTTCCGGCGGTAATGGTGAACAAGTTCTCAGTCGGGATGTGTTCAGACTTGGGCAACTGTTCGATTTCTTCCGGATGATGTCCTTCTATTTTACAACAGTTGGATACTACTTTTGTACCATGTTAACGGTGCTGACTGTATACATCTTTCTTTATGGAAAAGCATATCTGGCATTATCTGGTGTTGGGGAAACAATTGAAGAAAGGGCTAAGATAATGAAGAATACTGCCCTGACTGCTGCATTGAATACACAGTTTCTCTATCAGATTGGTGTCTTCACAGCTGTGCCAATGATCTTAGGCTTCATTCTCGAACAAGGCTTCTTAAGGTATCAAGCAACGGGCCGTGGGTTTGTTGTCCGCCATATCAAATTTTCAGAGAATTACAGACTTTACTCTCGTAGTCATTTCGTTAAAGGGCTGGAAGTTGTCCTTCTGTTGATTGTATATCTTGCGTATGGCTATAATAATGGAGGCGCAGTCTCGTACATTCTTCTGACAGTAAGCAGTTGGTTTATGGCTCTGTCCTGGTTGTTTGCTCCCTATTTATTCAACCCATCTGGATTCGAGTGGCAAAAGGTAGTGGAAGACTTCAGAGATTGGACAAATTGGTTGCTTTACAGAGGTGGCATTGGTGTTAAGGGAGAAGAAAGTTGGGAAGCTTGGTGGGATGAAGAACTGGCCCATATCAGGAGTTTTGGTTCAAGGGTAGCAGAGACCATCCTGAGTCTAAGATTTTTCATTTTTCAATATGGCATTGTGTACAAGCTTCATGTGCAAGGATCAGATACTTCATTGAGGGTTTATGGCCTGTCATGGGTGGTGCTGGCTGTGCTTATATTGCTTTTCAAGGTGTTCACCTTCAGTCAGAAGATATCAGTCAATTTCCAGCTTTTGTTACGCTTTATACAAGGAGTCTCGCTCTTGTTGGCACTGGCCGGTATAGCCGTTGCAGTTGCATTGACAAAGTTGTCCATACCCGACATATTTGCTTCCATATTGGCATTTATTCCCACCGGATGGGGAATTCTTTCTATTGCTTCTGCTTGGAAGCCTGTGATGAAGAAGCTGGGACTATGGAAATCCGTTCGATCGATTGCTCGCCTGTATGATGCTGGCATGGGAATGATCATCTTTATACCCATTGCATTCTTTTCATGGTTCCCATTTGTATCAACATTCCAAACTCGCCTCATGTTTAACCAGGCTTTTAGCAGAGGTCTAGAAATTTCCCTTATCCTCGCCGGGAACAATCCCAATACTGGGATATAG 1668 0.4251 KMRNLLEEFNTDHGLRRPTILGIREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNVTHHEYIQVGKGRDVGLNQIAVFEGKVSGGNGEQVLSRDVFRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALSGVGETIEERAKIMKNTALTAALNTQFLYQIGVFTAVPMILGFILEQGFLRYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNNGGAVSYILLTVSSWFMALSWLFAPYLFNPSGFEWQKVVEDFRDWTNWLLYRGGIGVKGEESWEAWWDEELAHIRSFGSRVAETILSLRFFIFQYGIVYKLHVQGSDTSLRVYGLSWVVLAVLILLFKVFTFSQKISVNFQLLLRFIQGVSLLLALAGIAVAVALTKLSIPDIFASILAFIPTGWGILSIASAWKPVMKKLGLWKSVRSIARLYDAGMGMIIFIPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274626g00001 555 Pfam 1,3-beta-glucan synthase component 1 242 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Stsc274626g00001 555 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274626g00001 Stsc-Chr274626 6 5815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274626g00001 1 555 Cell Wall Biosynthesis AT3G07160 78.583 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274626g00001 K11000 - gmx:100787540 1024.23