Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274402g00001 ATGGCCAAAACTAGTACTTGTTCCTTCTCCATGGTTATCATCCTGATGCTGCTACCATGTCTATGTCTTATACAGCAAGAAGCCATGGCCGCCAACACAAAGAAGACTTACATAGTTCAAATGAAACACAGACACAACCCTTCCAAACACCCCACGCACACAGACTGGTACGCAGCCACACTCAAATACCATAACTCTCACTCCGATTCGCTCCTATACTCGTACAAAACCGCCTATAACGGTTTTTCCGCTTCCCTCAACGATGAGCAGGCACACTTACTACGCCGTTCCGATTCGGTGCTTGCGGTTTACGAGGACACACTCTACACCCTCCACACAACAAGGACACCGGAGTTCTTGGGCCTCCAAAAGGGTTTAAACCTCTGGGAAGGCCACACCATTCAGGATCTTGACCATGCTTCCAACGACATCATCATCGGAGTCCTCGACACCGGGGTGTGGCCCGAGGCCAAGAGCTTCGATGATTCCGGCATGCCTCCGGTTCCCACAAGGTGGCGAGGCCAATGCGAGTCCGCTCCGGATTTCGATCCTTCTCTCTGTAATAGAAAGCTCATCGGCGCCAGGACTTTCTCCAAGGGCTACTTATTGTCCTCCGGCGGCGGTTATATGGTTAGGGAGAAGGAGCAAGTGTCTCCACGCGACCGTGACGGACATGGAACCCATACTGCAACTACTGCTGCTGGCTCTGCCGTCCCCAATGCCACTCTGCTTGGTTACGCCACCGGAACGGCGCGTGGAATGGCACCACAGGCGCGCGTCGCTGCTTACAAGGTCTGCTGGACAGGCGGCTGCTATGGCTCCGACATTCTTGCGGGGATTGACCAAGCCATCCAGGATGGCGTCGATGTGCTCTCGCTCTCTCTCGGCGGCTCCTCAACCGCCTACCACCGCGACACCATTGCTATAGGAACCTTCGCGGCGGTGCAGAAAGGAATCTTCGTGGCCTGCTCGGCAGGGAACAGCGGTCCTCGACAGGGATCTATCGCCAATGTGGCTCCCTGGGTCATGACCGTCGGAGCCGGAACCCTAGATCGTGATTTTCCTGCTTATGTTAAAATCGGAAACGGAAAACGATTCAGTGGTGTTTCTCTTTACGGTGGAGAAGGTATAGGAGACGAACCGGTGGGTTTGGTTTACTTCACCGATAAATCCAATTCGTCGAGCAGCGTTTGCATGCCCGGTTCGCTGGAACCGTCGCTGGTGCGAGGGAAGGTGGTGGTTTGCGACAGAGGGCTGAACGCGCGCGCCGAGAAGAGCGCGGTGGTGAGAGAAGCAGGAGGTGTGGGGATGATACTGGCGAACACTGTGGCGAGCGGCGAGGAAGTGGTGGCGGACAGCCACCTTGTGCCGGCCGTAGCGGTGGGGAGAAGCGCGGGAGATGAGATCAGAGAGTACGCTTCGTTGGATCCTAATCCAACGGCTGTGCTTAGCTTCGGTGGAACTGTTTTGAACGTGAGGCCTTCTCCTGTTGTGGCGGCCTTCAGTTCTCGTGGGCCTAACGGAGTGACTCCTCAGATTCTGAAGCCCGATATTATTGGGCCTGGAGTTAACATTTTGGCGGGATGGTCCGAGGCTGTTGGTCCATCTGGGTTATCGAAGGACACTCGCAAAACCCAATTCAACATCATGTCAGGTACGTCAATGTCGTGTCCACACATAAGCGGGTTGGGTGCATTGTTGAAAGCAGCACATCCAGATTGGAGTCCGAGTGCTATGAAATCCGCACTCATGACAACAGCTTCTACACACGACAACACAAACTCCCCTCTTAAGGATGCTGGTGGAGGAGGAGGAGAGTCATCAACACCCTGGGCTCACGGTGCTGGCTATGTGAACCCACAAAAGGCATTCTCTCCAGGGCTTGTGTACGACGCAACCACCGATGATTACGTTGATTTCTTGTGCTCCTTGGACTACTATACGCCTGAGACTATACAGCTTATTGTTAAGAATCCCAATGTGAATTGTTCGGATAGATTTGATGATCCGGGGCAGTTGAATTACCCGTCGTTTTCTGTTGTGTTTGGGAGCAAGAAGAGGGTTGTTACATACACTCGGACACTGACCAATGTTGGGGCAGCAGGATCCGTGTATGATGTGGATGTGGATGCACCCCCATCCTTGGTGGCAATTACGGTGAAGCCCACAAGGCTTGTGTTCCCCCAAGTTGGGGATAAACAAACTTACACAGTCACCTTTGTGTCCAACAACACTCCTCATCATGATGATTATTCGCTTCTTTCCAAATTCGGCACCATTGTTTGGAGCAATCAACTGCACCAAGTTAGGAGCCCCGTTGCTTTTGCATGGATCCATGATTCCTGA 2346 0.5324 MAKTSTCSFSMVIILMLLPCLCLIQQEAMAANTKKTYIVQMKHRHNPSKHPTHTDWYAATLKYHNSHSDSLLYSYKTAYNGFSASLNDEQAHLLRRSDSVLAVYEDTLYTLHTTRTPEFLGLQKGLNLWEGHTIQDLDHASNDIIIGVLDTGVWPEAKSFDDSGMPPVPTRWRGQCESAPDFDPSLCNRKLIGARTFSKGYLLSSGGGYMVREKEQVSPRDRDGHGTHTATTAAGSAVPNATLLGYATGTARGMAPQARVAAYKVCWTGGCYGSDILAGIDQAIQDGVDVLSLSLGGSSTAYHRDTIAIGTFAAVQKGIFVACSAGNSGPRQGSIANVAPWVMTVGAGTLDRDFPAYVKIGNGKRFSGVSLYGGEGIGDEPVGLVYFTDKSNSSSSVCMPGSLEPSLVRGKVVVCDRGLNARAEKSAVVREAGGVGMILANTVASGEEVVADSHLVPAVAVGRSAGDEIREYASLDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTPQILKPDIIGPGVNILAGWSEAVGPSGLSKDTRKTQFNIMSGTSMSCPHISGLGALLKAAHPDWSPSAMKSALMTTASTHDNTNSPLKDAGGGGGESSTPWAHGAGYVNPQKAFSPGLVYDATTDDYVDFLCSLDYYTPETIQLIVKNPNVNCSDRFDDPGQLNYPSFSVVFGSKKRVVTYTRTLTNVGAAGSVYDVDVDAPPSLVAITVKPTRLVFPQVGDKQTYTVTFVSNNTPHHDDYSLLSKFGTIVWSNQLHQVRSPVAFAWIHDS 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274402g00001 781 FunFam Subtilisin-like protease SBT1.9 25 112 - -
Stsc274402g00001 781 CDD Peptidases_S8_3 109 588 IPR034197 -
Stsc274402g00001 781 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
Stsc274402g00001 781 SUPERFAMILY Subtilisin-like 111 628 IPR036852 GO:0004252|GO:0006508
Stsc274402g00001 781 FunFam subtilisin-like protease SBT1.5 351 490 - -
Stsc274402g00001 781 Pfam PA domain 398 469 IPR003137 -
Stsc274402g00001 781 Pfam Fibronectin type-III domain 672 774 IPR041469 -
Stsc274402g00001 781 SUPERFAMILY Protease propeptides/inhibitors 35 110 - -
Stsc274402g00001 781 MobiDBLite consensus disorder prediction 588 612 - -
Stsc274402g00001 781 Gene3D - 641 777 - -
Stsc274402g00001 781 Pfam Subtilase family 142 592 IPR000209 GO:0006508|GO:0008236
Stsc274402g00001 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 774 IPR045051 -
Stsc274402g00001 781 CDD PA_subtilisin_like 357 481 - -
Stsc274402g00001 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Stsc274402g00001 781 Gene3D Peptidase S8/S53 domain 143 637 IPR036852 GO:0004252|GO:0006508
Stsc274402g00001 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 112 IPR037045 -
Stsc274402g00001 781 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Stsc274402g00001 781 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Stsc274402g00001 781 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Stsc274402g00001 781 FunFam Subtilisin-like protease SBT1.5 143 363 - -
Stsc274402g00001 781 Gene3D - 351 490 - -
Stsc274402g00001 781 ProSiteProfiles Serine proteases, subtilase domain profile. 123 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274402g00001 Stsc-Chr274402 3880 6649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274402g00001 34 777 Subtilisin-like Serine Gene Family AT2G05920 65.282 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274402g00001 - - adu:107457896 1367.83