Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274353g00001 ATGTTAGCTCTCACAGTGGCTTTTCTCTTCTCTCTTCTCTTTCTCCAAATCCTCTCTTCCAAGAGAAATAAATCTCCATCATCATCATCATCATCATCTTTATCTTTGAGTTACCCTCCAAGCCCACCATCACTTCCCATAATTGGCCATCTCCACCTTCTCAAACCCTTACTCCACCAAGCCTTCAAAGACCTCTCACAAAAATATGGACCACTTATATTACTTAAAATCGGTTCGGCTCGGTTTGTGGTGGCTAACAATCCATCTTTAGCCAAAGAGTTTCTCAAAGTAAATGAACTCACTTACTCTTCTCGTAAAATGAATATGGCTTCAAACATTGTTACCTACCATGATGCCACCTTTGCTTTTGCCCCATATGGCACCTATTGGAAGTTCATAAAAAAGCTTAGCACCACTGAGCTTTTGGGCAACCGAACTCTTTCGCAGTTTCTTCCCATTCGAACGAGGGAACTCCATGAGTTCATTCTATCTTTGGCTAAAAAATCAATGGCTAATGAGCCTGTGAACTTAACCGAATCGCTTATGAAGCTCTCCAACAACATCATATCCCGAATGATGCTTGGCATCAAGAGTTCTGGGACAAAGAGCCAAGCCGAAGAGGCTAGGATTTTGGTTCGTGACGTGACTAAGATCATTGGAGAGTTTAATATTGCAGACTTCTCAGGGTTCCTTAAGGTGTTGGATTTGCAAGGTTTCAAGAAGAGGGCCATGAAGATACATAAGAGGTATGATGCATTATTAGAGAAGATTATCTCTGATCGTGAGAATTTAAGAAGGAAGAACAAGGTTGTTATGAATAAGGGTTGTGATGATAAAGTGAAGGATTTTCTTGATATTTTACTTGATGTTTCCGAGGACAAAGATTGTGAGGTTCAGTTAACCAGAAATAATATCAAATCATTGATCCTGGATTACTTTACAGCAGCTACAGATACAACTGCAATCTCAGTGGAATGGGCAATAGCTGAACTGTTTAGCAACCCAAGGGTGTTGAAGAAGGCTCAAGAGGAGGTAGACAAAGTCACTATGAACCAAAGATTGGTGTGCGAAGATGACAGTTCAAACCTTCCATACATCCATGCAATCTTAAAAGAAACACTAAGACTCCATCCTCCAATAACCCTCCTTATGAGGAAGGGAATAAATGATTGTGTAGTCGGTGGTTATAAAATCCCAGCGGGCTCAATGGTATGCATTAATATTTGGGCCATGGGCCGAGACCCAATGATATGGGAGAATCCAATGGAGTTTAGGCCCGAGAGGTTTCTTGAGGGTCAAGGAAGCACCACAGATACCAAAGGACATCACTTCGAGTTATTGCCCTTTGGTACTGGAAGAAGAGGTTGCCCTGGCGTGCCCTTGGCCATGACAGAGTTGCCTGTTATTATTGGAGCTCTTGTTCAGTGCTTTGATTGGAACATGTTTGATTGTAATGGGAAGTTGTTGGATTATGGAACACCTATTGATATGGATGAACGGCCAGGATTAACTGTACCTAGAGCCCATGATCTTCATTGCATGCTAGATGCAAGACTCAATCCTATTCCATTCCTACAACTATAG 1584 0.4173 MLALTVAFLFSLLFLQILSSKRNKSPSSSSSSSLSLSYPPSPPSLPIIGHLHLLKPLLHQAFKDLSQKYGPLILLKIGSARFVVANNPSLAKEFLKVNELTYSSRKMNMASNIVTYHDATFAFAPYGTYWKFIKKLSTTELLGNRTLSQFLPIRTRELHEFILSLAKKSMANEPVNLTESLMKLSNNIISRMMLGIKSSGTKSQAEEARILVRDVTKIIGEFNIADFSGFLKVLDLQGFKKRAMKIHKRYDALLEKIISDRENLRRKNKVVMNKGCDDKVKDFLDILLDVSEDKDCEVQLTRNNIKSLILDYFTAATDTTAISVEWAIAELFSNPRVLKKAQEEVDKVTMNQRLVCEDDSSNLPYIHAILKETLRLHPPITLLMRKGINDCVVGGYKIPAGSMVCINIWAMGRDPMIWENPMEFRPERFLEGQGSTTDTKGHHFELLPFGTGRRGCPGVPLAMTELPVIIGALVQCFDWNMFDCNGKLLDYGTPIDMDERPGLTVPRAHDLHCMLDARLNPIPFLQL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274353g00001 527 Coils Coil 254 274 - -
Stsc274353g00001 527 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 509 - -
Stsc274353g00001 527 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 FunFam Cytochrome P450 family protein 30 513 - -
Stsc274353g00001 527 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Stsc274353g00001 527 Pfam Cytochrome P450 39 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 CDD CYP93 70 513 - -
Stsc274353g00001 527 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274353g00001 527 SUPERFAMILY Cytochrome P450 39 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274353g00001 Stsc-Chr274353 576 2420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274353g00001 36 514 Cytochrome P450 AT5G06900 41.580 2.61e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274353g00001 K23179 - gmx:100783503 746.888