Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274339g00001 ATGGCAACAGCAACAAGCAAAGGTGTCTTGTCAACTCTTGACAAGGCTAAGACACAAAAATACCATTACAAGGCAATTGTAATTGCTGGAATGGGATTCTTTACTGATGCCTATGATCTCTTTTGCATCACGGCTTTGACGAAGCTTATCGGCCGTCTTTACTACTATGATCCTACTAGTCATGACCCTGGAAAGCTACCAAAGAATGTTAACAACGCAATAACAGGTGTCGCGCTGTGCGGAACACTTGCAGGACAACTCTTCTTTGGCTGGCTTGGAGACAAGCTTGGTAGGAAAAAGGTTTATGGTATAACTCTTGCTACCATGGTTGGTTGTGCTTTAGCATCAGGCCTTTCCTTTGGTTCCACACCAAAATCCGTGGTGGGAACTCTATGCTTCTTTCGATTCTGGCTAGGATTCGGCATTGGAGGAGACTACCCTCTTTCGGCCGTCATAATGTCTGAATATGCTAACAAGAAAACTCGAGGCGGGTTCATCGCAGCTGTCTTCGCAATGCAGGGAGTTGGAATACTTGTTGCTGGAGGTGTAGCCATGGTTTTCTCCCACATATTCTTATCAGCCTTCCCGGCTGTTGATTTTGCAGTCGATCCGGTTATGTCTACTCAGCCTGAAGGAGATTTTCTTTGGCGAATTGTGCTAATGTTTGGAGCGTTTCCTGCAGCACTAACATATTATTGGAGAATGAAAATGCCGGAAACGGCCCGGTTCACAGCATTGGTGGAAGGAGATCACAAGAAGGCAGTGGAAGACATGGCGAAAGTTCTAGATAAGGACATACCTTCAGAAGAATCAAATTATAGGCTTGATGTTGCAGTTAGCACCTCTTATGGATTCTTCTCATCTGAGTTTCTGAACAGGCATGGCAAGCATCTTCTTGGAACCACCAGCACATGGTTCTTGTTGGATATCGCTTTCTATAGCCTTCAACTTGCACAGAAAGATATCTACCCTGTCGTTGGACTAGTGCAAAAGGCTTCCAAAATGAATGCCATTAGAGAGGTCTATGAACTCTCCAGAGCAATGTTTGTGGTGGCGCTGCTCACCACGGTGCCCGGATACTGGTGCACTGTATTCTTCATTGACAAGATTGGAAGGTACACAATCCAGCTTGTTGGGTTCCTTGCTATGTCTGTTTCTATGTGGTTTCTGGGTCACAATTATGGAGACTACAGGGGACAATCTGAATGTGGCCCGGACGCAAGAACAGAATACTGTAACGGCAAGCCTCAAATGTTTGCTATACTTTATGGAGTTTCCTTATTCTTTGCTAACTTTGGACCCAATAGTACAACATTTATAGTCCCAGCGGAGCTGTTCCCTGCTAGATTCCGGTCAACGTGTCATGGTTTATCTGCTGCAGCTGGAAAATCAGGAGCTATCATTGGTGCTTTTCTGGTCCAAAATTATATTGATAATTCAGATAATAGAACAAAGGGAATGAAGAAGGCAATCCTGGGACTTTCAGTTATCAATTTGATTGGATTCTTCTGCACTTTCTTGGTGCCGGAAACACAAGGTAGATCGCTTGAAGAGATCTCAGGAGAGAATAAAGAATTCCAGAGTGTTATTGTTGATGATGATCCAAATAAGGAAACAGATGATGCAGATAAGAAGAAAAATAATGGAAAAAAGGGAGAAAGAAATGCCAGTGTTGATGATTCTTCAGGAACCTTAATGGTTTGA 1704 0.436 MATATSKGVLSTLDKAKTQKYHYKAIVIAGMGFFTDAYDLFCITALTKLIGRLYYYDPTSHDPGKLPKNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLATMVGCALASGLSFGSTPKSVVGTLCFFRFWLGFGIGGDYPLSAVIMSEYANKKTRGGFIAAVFAMQGVGILVAGGVAMVFSHIFLSAFPAVDFAVDPVMSTQPEGDFLWRIVLMFGAFPAALTYYWRMKMPETARFTALVEGDHKKAVEDMAKVLDKDIPSEESNYRLDVAVSTSYGFFSSEFLNRHGKHLLGTTSTWFLLDIAFYSLQLAQKDIYPVVGLVQKASKMNAIREVYELSRAMFVVALLTTVPGYWCTVFFIDKIGRYTIQLVGFLAMSVSMWFLGHNYGDYRGQSECGPDARTEYCNGKPQMFAILYGVSLFFANFGPNSTTFIVPAELFPARFRSTCHGLSAAAGKSGAIIGAFLVQNYIDNSDNRTKGMKKAILGLSVINLIGFFCTFLVPETQGRSLEEISGENKEFQSVIVDDDPNKETDDADKKKNNGKKGERNASVDDSSGTLMV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274339g00001 567 Pfam Sugar (and other) transporter 26 520 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc274339g00001 567 Gene3D MFS general substrate transporter like domains 21 535 IPR036259 -
Stsc274339g00001 567 CDD MFS_PhT 26 511 - -
Stsc274339g00001 567 SUPERFAMILY MFS general substrate transporter 13 520 IPR036259 -
Stsc274339g00001 567 MobiDBLite consensus disorder prediction 527 567 - -
Stsc274339g00001 567 FunFam Inorganic phosphate transporter 1-6 21 534 - -
Stsc274339g00001 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 25 518 - -
Stsc274339g00001 567 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 513 IPR020846 GO:0022857
Stsc274339g00001 567 MobiDBLite consensus disorder prediction 527 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274339g00001 Stsc-Chr274339 1188 2957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274339g00001 8 524 Inorganic Solute Cotransporters AT5G43360 60.870 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274339g00001 K08176 - gmx:100820250 874.004