Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274227g00001 ATGCCACCACCATGGCCTATAGCTACTCCAACACCACCTTTCAATTTCCCAACATCAAAGTTCCTAACCCCCGCCACCCTCTCCGGCGACCCAAACTACATGGAACAGCTTCTCGTCCACTATGCCACCACCATAGAAACCAATGACGTCACCCTTGCTCAACAGCTCCTCTGGATCCTAAACAACATCGTACCCCAGGATGGCGACGCCAACCAGCACCTTACCTCAACCCTCCTACGCGCCTTAACATCACGCACTGCTAGAAATGGAAACGCACTGGAAGAACCGCTAGAACATTCCAGAGCCCTCGTGAAAACCCACGTTTACTCAGTCTTGGAGCTCGCAAACTTCGTTGACCTCACTCCCTGGCACCGGTTCGGCTTCACGGCCGCCAATGCCGCCATTCTAGAAGCTTCTGAAGGGTTCTCCATCGTGCACATCGTATACCTCAGCTTGATGCACTGCATGCAATACCCGACTCTGATCGATGCCATCACGGCACGCCACGTGGCGCCACCAAAGATCAAGCTGATAGTTGCTTC 542 0.5369 MPPPWPIATPTPPFNFPTSKFLTPATLSGDPNYMEQLLVHYATTIETNDVTLAQQLLWILNNIVPQDGDANQHLTSTLLRALTSRTARNGNALEEPLEHSRALVKTHVYSVLELANFVDLTPWHRFGFTAANAAILEASEGFSIVHIVYLSLMHCMQYPTLIDAITARHVAPPKIKLIVAS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274227g00001 181 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 177 IPR005202 -
Stsc274227g00001 181 Pfam GRAS domain family 34 177 IPR005202 -
Stsc274227g00001 181 ProSiteProfiles GRAS family profile. 25 181 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274227g00001 Stsc-Chr274227 113 654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274227g00001 13 181 GRAS Transcription Factor Family AT3G49950 55.882 1.96e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc274227g00001 GRAS 2.1e-31 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274227g00001 - - cam:101509453 205.297