LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc274204g00002	ATGCTAAGATCTAATCCTAATCCTGACTTGCTAGACTTTGATTCTGAAATTGAAAGAACGCTTAGGCGTGCAAGGCAAGTACGGAGGCGGATTGAGTTTGAGAATTCTTTGCGTTCTCAAACTAAAAATCTGGCAACCGAAGAAACTTTTGTTCAATCTTCTTACTTTGACTCTAAGTCTGACTTTGAGATACCCTTTTCTCCTACTTACGCAGCGGATTTACGTCTCCGTGTTGAGGGACAAAAAAGTTACCGGCGGAGTTTTTATTCGACGGTAATTCCGCCGGTACCATTCGAAATTAATGAGGCATCGAGCCTCTTCCCTCATTTCAAAGAAACCCTAATACAATCACGCCCTCTCCTCCAACCACCCCCTCCTCCGCGGTCCGTCACCCATACCCCTCCGAACCTTGCAGACGACGCCGTCCTCATCTCTGTCGCCGCCAGCCGTCGACAAGGGAGCGTTGAAGGCCCCCAACACTCACAGTTCGTTGTCGCGGTGTTGGGTAACGGTGGATTCGACCCCACATCCACCGCCGCTGCGTCCCCAGCGCCGTCCCCAGCCTCTTCTCTCTATGTCTCTTCTCTCTCTCTCTCACGGCGTCTCTCTCTGTCTCGCACTCGAAGCTCCTTCCCGCCAGCGCTGCGTCCAGCAGTCGTGTCCTCCACCACCAGCCACCGCGTCGTTCAGTATCCAGTCTCCAGCCACCGCGCCCTACAATGTCTAGCCACGACGTCTTCTGGTTTCCAAGCACGTCTCCAGTCTGCAGCCACCGCGTCGCAGCCTAGGAAGTTCGAGCATCCTAGACATGGTTCTCTCGGATTTCTCCCGAGGAAGCGTGCTGCTTGTCACAGAGGAAAAG	862	0.536	MLRSNPNPDLLDFDSEIERTLRRARQVRRRIEFENSLRSQTKNLATEETFVQSSYFDSKSDFEIPFSPTYAADLRLRVEGQKSYRRSFYSTVIPPVPFEINEASSLFPHFKETLIQSRPLLQPPPPPRSVTHTPPNLADDAVLISVAASRRQGSVEGPQHSQFVVAVLGNGGFDPTSTAAASPAPSPASSLYVSSLSLSRRLSLSRTRSSFPPALRPAVVSSTTSHRVVQYPVSSHRALQCLATTSSGFQARLQSAATASQPRKFEHPRHGSLGFLPRKRAACHRGK	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc274204g00002	287	Gene3D	Ribosomal protein L3, domain 3	261	287	IPR044892	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc274204g00002	Stsc-Chr274204	5473	6577	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc274204g00002	263	287	Cytoplasmic Ribosomal Protein Gene Family	AT1G61580	92.000	1.46e-08	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc274204g00002	K02925		K10999	ncol:116267275	55.0694