Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274151g00001 ATGGCAGCCAAAAGTAGTGACTTGAAGCTTTTGGGTGGATGGTTCTTCAGCCCTTTTGTCATAAGGGCGAAGATTGAAGGATTGGAATATGAGAACATTGAAGAGGACTTGAACTCCAAAAGTGACCTTCTTCGTTCAAATCCTGTTTACAATAAAGTCCCAGTTCTAATTCATGGTGACAAATCCATATGTGAATCCTCAATCATAGTTGAATATATTGATGAGGTTTGGTCCAATGCTCCTTCTATCCTTCCCCAAGATGCTTATGACAGAGCAATTGCTAGATTCTGGGTTTCATACATTGATGACAAGATTGATAGGCCTTTGATTTTTTAG 336 0.3899 MAAKSSDLKLLGGWFFSPFVIRAKIEGLEYENIEEDLNSKSDLLRSNPVYNKVPVLIHGDKSICESSIIVEYIDEVWSNAPSILPQDAYDRAIARFWVSYIDDKIDRPLIF 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274151g00001 111 CDD GST_N_Tau 8 77 - -
Stsc274151g00001 111 SUPERFAMILY Thioredoxin-like 13 104 IPR036249 -
Stsc274151g00001 111 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 16 104 IPR045073 -
Stsc274151g00001 111 Pfam Glutathione S-transferase, N-terminal domain 20 75 IPR004045 -
Stsc274151g00001 111 Gene3D - 84 110 - -
Stsc274151g00001 111 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 81 IPR004045 -
Stsc274151g00001 111 Gene3D Glutaredoxin 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274151g00001 Stsc-Chr274151 2676 3139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274151g00001 5 104 Glutathione S-transferase Gene Family AT1G10370 57.547 2.54e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274151g00001 K00799 - gmx:547576 148.288