Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274147g00001 ATGGTGGATGCAACTGGTCTAGAACAATTTATGAGTGCTTTAGCTGATATGGCTCGAGGTGCTCATCAACCCTCCATTCTACCTATATGGCAACGAGAGCTCCTATTTGCAAGAAATCCACCACAAATCTCATGCAATCATCCCGAATATGATCAACTACCAATAAATACTCAAGACAGAGCCATCATTTCTTCGTACGAGAAGGATATGACTCAACGCTCCTTCTTCTTTGGACAAACCGACATAGCTTCCCTTCATGGCCTGGTTCCACCTCACCATGGCCACTGCACTCGCTTTGAACTTATAACTGCATGTATATGGTGTTGCCGTACCAAAGCATTGCAACTTGCACCAGAAGATGAAGTTCGCATGATGTGCATCGTGAATGCACGTGATAGGTTTAACCCTAAGATTCCAATTGGTTACTACGGAAACGTTTTTGTTTATCCGGCAGCAGTTACAACCGTAAAGAAGCTCTGTGAAAATCCGCTTGGTTATGCCGTTGAGTTGATAAAGAAAGTAAAAGCTGAGGTGACTGAAGAGTACGTGCGTTCTGTTGCAGATCTAATGGTCACAAAAAGACGACCGTTATTTACAACCGTTGGATCTTTCATTGTGTCAAACTTGACACGTGTTGGGCTTATAGAAGTGGATTTTGGATGGGGCAAAGCACTGTATGCTGGAGTGTCTAAAGGTGGAGCTGGGCCGAGTATTCATGATGCAACCTTTTACATGGATTATCAGAATGAAAATGGAGAAGAAGGTGTATTGTTTCCAATTTACTTGCCTTCCATCGCTATGGAGAGATTTGAGAAAGAGTTGGGTGATATGCTTGGTGGGGACCTTAGTAATAATCAACAACCTACAAAGACTGATGAAATTCCTACACTTAATATCATCAGGGACAAGGGTTCGAAACCCAAGTTTCCCATTTTGAAAAAATTTCATCTTGGAGAGAGAACCAGCCGGGTTCCGGTTCGGTCTGACCGACCGGTTTTCGGCCAGTTCACCGATTCAATTCCAGCTTTCTCAAGAGCGATTTCAGCATGCAGACCGATCCGCTTTCATGACCGAACGACGGTTGAACCGGTTCGACCGTCCGGTCCGAACCGGTTTACAGAACCATGCTAA 1131 0.4439 MVDATGLEQFMSALADMARGAHQPSILPIWQRELLFARNPPQISCNHPEYDQLPINTQDRAIISSYEKDMTQRSFFFGQTDIASLHGLVPPHHGHCTRFELITACIWCCRTKALQLAPEDEVRMMCIVNARDRFNPKIPIGYYGNVFVYPAAVTTVKKLCENPLGYAVELIKKVKAEVTEEYVRSVADLMVTKRRPLFTTVGSFIVSNLTRVGLIEVDFGWGKALYAGVSKGGAGPSIHDATFYMDYQNENGEEGVLFPIYLPSIAMERFEKELGDMLGGDLSNNQQPTKTDEIPTLNIIRDKGSKPKFPILKKFHLGERTSRVPVRSDRPVFGQFTDSIPAFSRAISACRPIRFHDRTTVEPVRPSGPNRFTEPC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274147g00001 376 Pfam Transferase family 1 274 - -
Stsc274147g00001 376 Gene3D - 57 274 IPR023213 -
Stsc274147g00001 376 Gene3D - 1 52 IPR023213 -
Stsc274147g00001 376 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274147g00001 Stsc-Chr274147 4955 6932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274147g00001 9 274 Monolignol Biosynthesis Gene Families AT5G48930 25.818 2.04e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274147g00001 K19861 - gmx:100787907 347.821