Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc274038g00002 ATGGAACCGTGGTTCTTGGTGGCGGTCTCCGCATGCGTCTGTGTTCTCATCAGAGCAATAATAACTAACTTTACAAGCACCACTCACGGGCCTCGTCTTCCTCCGGGCCCACCATTCATTCCTGTTTTAACAACCATCTCCTGGCTTGCTAAATCATTCTCCCAGTTTGAGCCCGTCCTCGTGGGCCTACGGGCCAAGTACGGGCCCATCATCACACTCCGTATTACCAGCCGCCCTGCCATCTTCGTGGCGGACCGCTCCATCGCCCACCAGGCACTCGTCCAGAAGGGCGCCGTCTTCTCCGACCGGCCCCCTGCCCTCGCCGTCGCCCGCATCTTCACCTGCAACCAGCACGACATCAACTCCTCACCGTACGGATCCACGTGGCGCACTCTCCGTCGCAACCTCACCAGCGAGATGCTCCACCCTAACCGCGTGAAATCGTTCTCCTCAGTCCGCCGCTGGGTCCTCGACGTCCTCGTGAACCGCCTGAAGTCCGATTCCGAAAGCGGAAACTCCGTCAGAGTCATCGATCATTTCCACTACGCCATGTTCTGCTTACTCGTCTTCATGTGCTTCGGCGAAAAGTTGGACGAGAAGCAAGTCAAGGACGTGGAGCGTGTTGAGCGAGCGCTGCTTCTTTCTACTAGTAGATTCAATATCCTCAATTTCTGGGAACCTATCACTCGGATTCTCTTCCGGAAACGGTGGCAGGAGCTTTTCAAGCTTATGAAAGACCAGAGCGATGTGTTGATTCCGCTAATTAGGGCTAGAAAGACTATAAAGGAACACCGCAGTGGCAGTGGCAGTGGCGGTGGCGGTGATATTGTTTCGTATGTGGATACTCTGTTGGATTTGGAGTTGCCGGAGGAGAAGCGGAAACTGAACGACGAAGAATTGGTGACTGTGTGTTCGGAGTTCTTGAGCGCCGGCACGGACACCACGGCCACAGCGCTGCAGTGGATTATGGCGAATGTGGTGAAGTACCCGCACGTTCAGCAGAGACTCCTGGAGGAGATTAGGGAGGTGAAGGGTGACGGTGAGAGTAAAGAGGAGGTGAAAGAAGAAGAGCTGCAGAGGATGCCGTACTTGAAGGCAGTGGTGTTGGAAGGGCTACGGCGGCATCCTCCCGGGCACTTTGTTTTGCCACATACTGTAACAGAGGATGTTGAGTTGAATGGTTACTTGATACCGAAGAAAGGGAGTGTGAATTTCATGGTGGCGCAGATAGGTTGGGACCCTGAGGTTTGGGAGGATCCCATGGAGTTCAAGCCGGAGAGATTCTTGGAGAAGGAGAAGGAAGACGGTGTTCCTTTCGACATCACCGGGAGCAAGGAGATCAAGATGATGCCCTTTGGAGCAGGGAGGAGGATCTGCCCTGGTTTTAACCTGGCAATGCTCCATTTGGAGTACTTTGTAGCCAATTTGGTCTGGAATTTCGATATGAAGGTGCCGGAAGGAGGAAGCGTCGACTTGACGGAGACGCAAGAGTTTACTATTGTCATGAAGAATCCATTGCAAGCTCATATTACTCCTAGGATCTGA 1545 0.5346 MEPWFLVAVSACVCVLIRAIITNFTSTTHGPRLPPGPPFIPVLTTISWLAKSFSQFEPVLVGLRAKYGPIITLRITSRPAIFVADRSIAHQALVQKGAVFSDRPPALAVARIFTCNQHDINSSPYGSTWRTLRRNLTSEMLHPNRVKSFSSVRRWVLDVLVNRLKSDSESGNSVRVIDHFHYAMFCLLVFMCFGEKLDEKQVKDVERVERALLLSTSRFNILNFWEPITRILFRKRWQELFKLMKDQSDVLIPLIRARKTIKEHRSGSGSGGGGDIVSYVDTLLDLELPEEKRKLNDEELVTVCSEFLSAGTDTTATALQWIMANVVKYPHVQQRLLEEIREVKGDGESKEEVKEEELQRMPYLKAVVLEGLRRHPPGHFVLPHTVTEDVELNGYLIPKKGSVNFMVAQIGWDPEVWEDPMEFKPERFLEKEKEDGVPFDITGSKEIKMMPFGAGRRICPGFNLAMLHLEYFVANLVWNFDMKVPEGGSVDLTETQEFTIVMKNPLQAHITPRI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc274038g00002 514 CDD CYP77_89 66 507 - -
Stsc274038g00002 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 Gene3D Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 SUPERFAMILY Cytochrome P450 34 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 Pfam Cytochrome P450 34 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc274038g00002 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 506 - -
Stsc274038g00002 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Stsc274038g00002 514 FunFam Cytochrome P450 family protein 27 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc274038g00002 Stsc-Chr274038 3806 5882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc274038g00002 1 513 Cytochrome P450 AT1G64940 57.834 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc274038g00002 K24184 - gmx:100788826 712.22