Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273969g00002 ATGGAAAATAGTTCATCATCAATTTCAACAACATTCTTGTCCATCACCTTCTTCCTACTACTAATTCCTTCTTGTGTTATCTTCGTGAATTGCAACACCTTTGAAAGTGAATCAATATCAATAGATTTGCCGCCGATCCCAGACATTTTAGGGTTCTTAGACTTGAGACTAGCTCTTATATTCCCAATAATTCAAGCTTTCAAGAACACAATAACATCTGATCCGTTGGGTGTAACCTCAACATGGATCGGTCCAAACATATGCAACTACACAGGCTTCTACTGCGACAACCCACCCGACAACAAAACCGCCGTAACCGTCGCCTCAATAGACTTCAACGGCTTCCAACTCTCCGCCCCATCACTTGACGGCTTCATAGATCAGCTCCCGGACTTGGCAATATTTCACGCCAACTCTAACAACTTCGCCGGCACCATTTCACCAAACATAGCGAAATTGAAGTTCTTGTATGAACTTGACTTGAGTAACAACCTCCTCTCCGGCGTGTTCCCTGTTTCGGTTCTCAACATGCCCACATTGTCCTTTCTCGACATAAGGTACAATTTGTTTTCCGGCACGGTGCCGCCGAGCATATTCACCCAACCATTGGACGTTCTTTTTCTGAACAACAACAATTTCTTCCAGAAGCTTCCCACCAACTTAGGAGACACAAAGGTTCTCTACCTCACTCTCGCAAACAACAAACTCACCGGCCCCATTCCTCCATCCATCGGAAAAGCCTCCGCCACGCTCACCGAAGTTCTTTTCCTCAACAACCTCCTCACCGGCTGCCTTCCCTACGAGATTGGCTTCTTGACAAAGGCCACGCTCTTCGACGCCGGAAACAACCTGCTCACGGGGCCGGTCCCGTCCTCCTTGGGGTGCCTGGAGAGCGTGGAGCAGCTTAACCTAGCCGGGAACCTGTTGTACGGACAGATTCCGGAGGTGGTTTGCGCGCTTGGTAATCATAACTTGGCGAATTTGTCGCTGTCTAATAACTACTTCACGAAAGTGGGACCGGTGTGCAGGAGCATGATCAAGAAGGGTGTTGTTGATGTGAGGAAGAACTGCATTTCGGGGATTCCGAATCAGAGATCGGCGCAGGAGTGTTTCACGTTCTTCTTGACGCCGAGAAGTTGTCCGCGCGCGGCGTGGTTTAACTTGATACCGTGTAAGATTCCGCCGCGGAAGAATAGTACAATAACAACGACGACGAGGAAGAGGAATTTGCTTTCATATTCTGCTCTTTCCAGAAATAGAGTACTTTTATAG 1272 0.4796 MENSSSSISTTFLSITFFLLLIPSCVIFVNCNTFESESISIDLPPIPDILGFLDLRLALIFPIIQAFKNTITSDPLGVTSTWIGPNICNYTGFYCDNPPDNKTAVTVASIDFNGFQLSAPSLDGFIDQLPDLAIFHANSNNFAGTISPNIAKLKFLYELDLSNNLLSGVFPVSVLNMPTLSFLDIRYNLFSGTVPPSIFTQPLDVLFLNNNNFFQKLPTNLGDTKVLYLTLANNKLTGPIPPSIGKASATLTEVLFLNNLLTGCLPYEIGFLTKATLFDAGNNLLTGPVPSSLGCLESVEQLNLAGNLLYGQIPEVVCALGNHNLANLSLSNNYFTKVGPVCRSMIKKGVVDVRKNCISGIPNQRSAQECFTFFLTPRSCPRAAWFNLIPCKIPPRKNSTITTTTRKRNLLSYSALSRNRVLL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273969g00002 423 Gene3D Ribonuclease Inhibitor 63 224 IPR032675 -
Stsc273969g00002 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 394 - -
Stsc273969g00002 423 Gene3D Ribonuclease Inhibitor 225 420 IPR032675 -
Stsc273969g00002 423 SUPERFAMILY L domain-like 67 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273969g00002 Stsc-Chr273969 5844 8044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273969g00002 35 377 Leucine-rich Repeat extension Gene Families AT3G24480 44.023 2.08e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273969g00002 - - gmx:100813314 562.377