Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273961g00003 ATGGATCTTTCTGAGTTAGCAAAGAAGCTTTCCCTCTCTGAATCCAAACTCGTGGTCCGCAAAGCCGCCGAGCTTCGTCGCCTCTCCGATGTCCTCTTCGATTCCTCCATCATCGGAGTCGGCGAAGTTGCCAAAGCTCTAATCTGCTTGGAAATTGCTGCTACCAGACTCGGTGTTCTGTTCGATCGATCCTGTGCGGTGAGGCTCAGCGGCTTGTCAGAAAGGGCTTATATCCGATGCTACAATTCACTTCACAATGGTCTCGGCGTAAAAATGAAGCTAGATGTAAGGGAATTGGCAATTCAGTTCGGATGCGTTCGAATTATCCCCTTCGTCCGTGATGGCCTCAAGCTATACAAGGATCGGTTTACTGCTTCATTGCCAGTGTCTCGCCGTGCAAGTGCTGACTTTACTCGTCCGGTGTTTACTGCTGTTGCTTTTTATTTATGTGCAAAGAAACATAAGCTTAAAGTCGACAAGGTTAGGCTGATTGAGCTTTGTGGTACATCTGAATCTGAATTTTCTAGTGTTTCTACTACCATGAAGGACTTGTGCCATGATGTTTTTGGGGTTGGTAAGGAGAAGAAGGATCCAAGAGAAGTGAAATCAAATCGAGAACTGCTTGATGTCTTACCTAGCAAAAGGAAACCGGAGGATGGTGGTTATTTGTCTGATGAAGGTCCAGAGGTGATAATGAATAATCTCAATAGAGCTTAA 717 0.4547 MDLSELAKKLSLSESKLVVRKAAELRRLSDVLFDSSIIGVGEVAKALICLEIAATRLGVLFDRSCAVRLSGLSERAYIRCYNSLHNGLGVKMKLDVRELAIQFGCVRIIPFVRDGLKLYKDRFTASLPVSRRASADFTRPVFTAVAFYLCAKKHKLKVDKVRLIELCGTSESEFSSVSTTMKDLCHDVFGVGKEKKDPREVKSNRELLDVLPSKRKPEDGGYLSDEGPEVIMNNLNRA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273961g00003 238 Gene3D - 92 188 - -
Stsc273961g00003 238 FunFam Origin recognition complex subunit 6 92 188 - -
Stsc273961g00003 238 CDD Orc6_mid 93 188 - -
Stsc273961g00003 238 Pfam Origin recognition complex subunit 6 (ORC6) 3 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Stsc273961g00003 238 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 222 IPR020529 GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273961g00003 Stsc-Chr273961 5143 7031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273961g00003 1 224 Core DNA Replication Machinery Family AT1G26840 69.643 3.35e-114 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273961g00003 K02608 - gmx:100777539 385.185