Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273940g00002 ATGGCGTCGTTTGATCCATGTAGTCGACCCCACCTAGTGGGACAAGGCTTTGTTGTTGTTGTTGTTCAGTTTCTAAATAAGTTACAGCACTTGAATCTGTCCTGCTGCTATAAGCTGAAGGAAACACCAGATCTTTCTGGGGCTCCCAATCTTAAAACACTTTATCTTGAAGATTGTGACAAGCTGAATTATATTCATCCGTCTCTAGCACACCACAAGAGCCTTGTTGTATTGAATTTAAGTAGATGTAGCATGCTTAAAACACTTGGAGAAAAATTGGAGATGAGTTCACTCAAGAAACTAGATCTACAAGAGTGCACTAGTTTGAGAAGAGTGCCAGAATTTGGGGAATGCATGAAACAATTATCGATTCTTACTATTGGTAAGATAGGCAAATCAAAGCTACCCAAGACGTTTGTAAATTTGGTCGGCCTGTCTGAGTTGAACTTTATCAACTGCGACGTTACTGGTGTTTGCTTATCACATGGATGTTTTGTTGGTGTAAAGAAGTTGGAGTTAATAGAATGCAGTTGGCATAGTCGTTTTCTATACTGCTTTCATAGTTTAGAGTCCCTCACTGTAGACGGTTTGCCTGAAAGCGAAAGTATAAGTACACTTATGGGTTCTCTCTCTCAGCTGACCTCTTTGACTAGTCTCACATTAGAAGGATGTTTTGACAAATCTGTAGAGCAGACCCCTTACTACGATGTTGCCCACTTAGCGTTGTTGACGGATTTGGATTTATCGTCCAACTATTTTTCAAGACTTCCAATAAAGCTTCCATCAAGTCTAAGAGAATTACACGCAGAAGAAGGTTGTGATTCACTGGATGCATCCAATGTGAATGATGTTATATCAAAGGCATGTTGTGCCTTCGCAGAATCATCTACCCAAGATCCTGAAGACATCTTGCAAATGTGGATCAATGTGAAGGAAATTCCAGCATGGTTTGATCATCAAGAACAATATAATGGAGTATCAATCTCATTCCCACATAATTGCCCTTCAACTGAAACTGTGGCACTTGCTCTATGTTTCCAATTTGAAATTGGCCGCACCTATTACAAAGATGAATCCACCACGGTGACCTGCAACGCAGAGGATGCTATTCGCCATTTGGCATCTCGCAAAAGCTCTGATCCACCTCAACTCTCCCCTCAAGCGATCTCCCACAATAATATCTTATTAACTCTTTGGTGTTGA 1203 0.4073 MASFDPCSRPHLVGQGFVVVVVQFLNKLQHLNLSCCYKLKETPDLSGAPNLKTLYLEDCDKLNYIHPSLAHHKSLVVLNLSRCSMLKTLGEKLEMSSLKKLDLQECTSLRRVPEFGECMKQLSILTIGKIGKSKLPKTFVNLVGLSELNFINCDVTGVCLSHGCFVGVKKLELIECSWHSRFLYCFHSLESLTVDGLPESESISTLMGSLSQLTSLTSLTLEGCFDKSVEQTPYYDVAHLALLTDLDLSSNYFSRLPIKLPSSLRELHAEEGCDSLDASNVNDVISKACCAFAESSTQDPEDILQMWINVKEIPAWFDHQEQYNGVSISFPHNCPSTETVALALCFQFEIGRTYYKDESTTVTCNAEDAIRHLASRKSSDPPQLSPQAISHNNILLTLWC 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273940g00002 400 SUPERFAMILY L domain-like 23 264 - -
Stsc273940g00002 400 Gene3D Ribonuclease Inhibitor 131 290 IPR032675 -
Stsc273940g00002 400 Gene3D Ribonuclease Inhibitor 16 130 IPR032675 -
Stsc273940g00002 400 Pfam C-JID domain 311 355 IPR045344 -
Stsc273940g00002 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 23 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273940g00002 Stsc-Chr273940 8136 9654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273940g00002 25 152 WRKY Transcription Factor Family AT4G12020 34.375 2.89e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273940g00002 - - adu:107485884 358.607