Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273901g00001 AGTATACTTCATGATTGGGATGATAAACAGTGCTTGAAGCTTTTGAAGAATTGTCACAAGGCCATTCTCAATGATGGGAAGGTGATTGTGGTGGACAACATTCTTCCTAATGTGCCTGAACCAACTGCTAATGCCAAGAACGCATTTGGATTTGATGTTGTCATGATGACTCAAGCGTTCGGAGGGAAGGAACGAACCAAGCAAGATTTCATGCACTTGGCTAAAGGATCTGGATTCACTTCTGTAACATTTGTGTGCTGTGTTTCTAGCTTATGGGTTATGGAGTTCTATAAGTAG 297 0.4141 SILHDWDDKQCLKLLKNCHKAILNDGKVIVVDNILPNVPEPTANAKNAFGFDVVMMTQAFGGKERTKQDFMHLAKGSGFTSVTFVCCVSSLWVMEFYK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273901g00001 98 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 96 IPR029063 -
Stsc273901g00001 98 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 98 IPR016461 GO:0008168
Stsc273901g00001 98 Gene3D Vaccinia Virus protein VP39 2 88 IPR029063 -
Stsc273901g00001 98 Pfam O-methyltransferase domain 1 79 IPR001077 GO:0008171
Stsc273901g00001 98 PANTHER O-METHYLTRANSFERASE 2 97 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273901g00001 Stsc-Chr273901 9464 9760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273901g00001 2 98 Monolignol Biosynthesis Gene Families AT1G21100 46.939 3.67e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273901g00001 K13066 - aip:107606823 145.976