Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273848g00003 ATGAAAAAACCCAATAATAATAAACTTCCACCAGGGCCTAACCCTTTCCCTATAATAGGAAACATTTTAGAACTTGGTAGCCACCCTCACAAATCACTCACTAAGCTTTCACAAACTTATGGACCAATAATGACTCTTAAGCTTGGTAACATAACCACCATAGTTATTTCGTCTCCACAATTAGCAAAAGAAGTCCTCCATAAACATGACCAAACCTTCTGTGACAGACAAACCCCGGATACTCTTACGGCATTGGATCACCATAAAGTTTCGGTGATATGGTTGCCGTCAAGAAATAAGTGGAGGAAACTTAGGAGAATCTGTGCCGATAATTTGTTCTCAGTCAAAAAACTTGATTCTACGCAAGTTCTTCGCCAAAAGAAAATCCAAGAATTGATGGATTTTGTGAAGGAAAAAAGTGAAAAGGGCGAATCTTTAGATACGGGTAATGCTGCTTTTGTAACCGTGCTTAATTCCATATCAAACACTTTTTTCTCTATAGATTTGGCTCATTACAATTCCTTGGAGTCTCAAGAGTTCAAGGACACCATTTGCGGCATTATGGAAGAAATTGGAAGGCCTAATGTTGTGGACTTCTTTCCAATCATGAGGATGCTTGATCCACAAGAAGAAAGAATTCAAAGAAGAGCTTTGGAAGTAGAATCAAATGGAAGGAAAGACTTGCTAGATTCTTTGCTAGATCTCATGTTGGAAGATAATTCAGAATTGAGCCGATCTCAAGTGTTACATTTATTAATGGATTTATTTAATGCTGGAATAGACACAACAAGTAGTATGATAGAATGGACAATGACAGAACTTGTCCGTAATCCAAAAGAATTAAGAAAAGTTAGAGAAGAGCTTCATCAAGTTCTTGGCAAAGAACAACAACAAATTGAAGAATCACATATTTTAAAGCTTCCATTTCTAAGAGCAGTAGTGAAAGAAACGTTTCGGTTGCACCCACCAGCACCATTTCTACTACCACACAAATCATCATCACAAGAGGACATTGAACTATGTGGTTTCATGGTGCCTAAAAATGCACAAGTTTGGGTTAATGTGTGGGGCATGGGAAGAGATTCAAGTATTTGGACAAACCCTAATGAATTCATGCCTCAAAGATTCTTGGAAAATAATAATAATATTGATTTTAGAGGTAATGATTTTGAATTAATTCCCTTTGGAGCTGGAAGAAGAATTTGTCCCGGATTGCCATTGGCTTCTAGAAGTGTTCATATTGTGTTGGCTTCTCTTCTATATGGATATGATTGGAAACTCCCAAATGAATTGGAGGCTGAGGGCATTGATATGTCTGAAAATTTTGGGATTACCTTACACAAAGCCCAACCTCTCCAAATTATTCCCATACAAACATAA 1380 0.3725 MKKPNNNKLPPGPNPFPIIGNILELGSHPHKSLTKLSQTYGPIMTLKLGNITTIVISSPQLAKEVLHKHDQTFCDRQTPDTLTALDHHKVSVIWLPSRNKWRKLRRICADNLFSVKKLDSTQVLRQKKIQELMDFVKEKSEKGESLDTGNAAFVTVLNSISNTFFSIDLAHYNSLESQEFKDTICGIMEEIGRPNVVDFFPIMRMLDPQEERIQRRALEVESNGRKDLLDSLLDLMLEDNSELSRSQVLHLLMDLFNAGIDTTSSMIEWTMTELVRNPKELRKVREELHQVLGKEQQQIEESHILKLPFLRAVVKETFRLHPPAPFLLPHKSSSQEDIELCGFMVPKNAQVWVNVWGMGRDSSIWTNPNEFMPQRFLENNNNIDFRGNDFELIPFGAGRRICPGLPLASRSVHIVLASLLYGYDWKLPNELEAEGIDMSENFGITLHKAQPLQIIPIQT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273848g00003 459 PRINTS E-class P450 group I signature 402 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 61 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 392 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 354 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 37 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS E-class P450 group I signature 311 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 FunFam Cytochrome P450 76C4 1 455 - -
Stsc273848g00003 459 CDD CYP76-like 37 456 - -
Stsc273848g00003 459 Gene3D Cytochrome P450 1 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS P450 superfamily signature 312 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PRINTS P450 superfamily signature 393 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 458 - -
Stsc273848g00003 459 SUPERFAMILY Cytochrome P450 10 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 Pfam Cytochrome P450 10 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273848g00003 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 395 404 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273848g00003 Stsc-Chr273848 7524 9540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273848g00003 9 458 Cytochrome P450 AT2G45550 48.101 2.02e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273848g00003 - - gmx:100809483 609.372