Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273842g00001 ATGGAAGATGTTAACACTAATTGGCTACCATTCAACCATGAATTTGCCATTAGAAGGTTTTGCCCTGAAAGAATGGAGCAAGAGCAAAGAGAAGAGTGCCATGATCAAGATGCCCGGTTATCATGTTCATCCGATTTTACCATCAACCCATGTTTGGCTAATTCCTCAGAGGTTGATGACTTTGTTGAAAGCATCATCAACATGGATCATCACTATGACTATGATGATGATGATTACCATGACCATGGAGAAGAACAAGATCAAGATCAAGATGAAGATCATATTGATGCATATTCCATGGTGATGAATGATGATGATCATGTCTACGGATATGCTCCAATTACCATGGAGGATGATGAAGAAACAGAGATAATGGAACAAATTATGGATGGTTCTTATGGTGCTCCACCGGAGCTAGTGTCCACCGTGGAAGATCCAAGTCGAGGCATCGATCGAGGGTTGGATTTGATTCACATGTTGTTGGCTTGTGCTGAGGCAGTAGGATGCAGAGACACACAACCGGCACACTTTCTTCTCAACAGAATTTGGAGTGTGGCTAATCCTTGTGGTAATTCATTGGAAAGGGTGTCCTATTGTTTTGCCACGGGTCTAAAGCGTAGGCTTTCACTTCTTCCATTCAATACTACTACACAACGCACAAGTTTTATTACGGAGGATGTTCCTTTGATTACAAGGGAGAATAAATTAGAAGCTTTTCAACTTCTTTGCCAAACAACTCCTTACATTGCCTTAGGGTTCATGGCTGCAAACGAAACTATTTATCAAAAATCAGTTGGGAAAAGTTCAATACATATAATTGAGCTTGGAATGGAAAATACCCTTCAATGGCCCTCCTTGTTAAGGGCACTTGTTTCGAGACCAGAAGGCCCGCCAAGGATTCGGATCACCGGGCTAATCAGGGCTGAAGACTACTCAAAACTCGAAGCTAGCATGAGTTTTCTTGTGGAGGAAGCAAAATCATTGGGAGTGACAGTGGAGTTTCGCCTAATACCGGAGGCTGCAGTTCTATCTCTTTTTACAGCGGAGAAGTTGCAACTGAGAGAAGGGGAAGTTTTATTTGTCAATAGTATCCTTCAATTGCATACACATGTTAAGGAAAGTAGGGGTTTCTTGAAGGAAATTTTGCTATCAATTAAGAAGCTTGGTCCTTGTACATTTACCATTGTAGAGCAAGATTCAAATCACAATGGACCTTTCTTCCTTGGGAGGTTTCTTGAATCTTTGCATTATTACTCGGCGATTTTCGATTCCCTAGAAGAATGCATGCCGAGGGATAGCCAGCAGAGGATGAAGATAGAGGGTGCATATTTCGCTGAGGAAATTTGCAACATTGTGGCCTACGAGGGACCAGATAGGATAGAGAGACACGAAAGGGCCGAAAAGTGGCGACGACAGCTAGGCCGGGCTGGGTTCCAAGTTATGCCATTGAAGTGCACTAGTCAAGCTAGGATGTATCTCTCTGTTTATGATTGTGATGGATATACATTGTCAAGTGAGAAGGGTTGCCTTTTACTTGGGTGGAAAGGAAGACCTATAGTAATGAAGAAGCCGGCCAGGGAGGCACGAAGAAGCGGAGGCAGCCGGGATCACGCGAAGAAGAAGAGACAGACGTTGAGGCTAAAGAAGCGGTGGCGATGCAATGAAGTTGCGGTGGAAGGAGGAAGAAGAGAGAGGAGATCGCGAAG 1706 0.4373 MEDVNTNWLPFNHEFAIRRFCPERMEQEQREECHDQDARLSCSSDFTINPCLANSSEVDDFVESIINMDHHYDYDDDDYHDHGEEQDQDQDEDHIDAYSMVMNDDDHVYGYAPITMEDDEETEIMEQIMDGSYGAPPELVSTVEDPSRGIDRGLDLIHMLLACAEAVGCRDTQPAHFLLNRIWSVANPCGNSLERVSYCFATGLKRRLSLLPFNTTTQRTSFITEDVPLITRENKLEAFQLLCQTTPYIALGFMAANETIYQKSVGKSSIHIIELGMENTLQWPSLLRALVSRPEGPPRIRITGLIRAEDYSKLEASMSFLVEEAKSLGVTVEFRLIPEAAVLSLFTAEKLQLREGEVLFVNSILQLHTHVKESRGFLKEILLSIKKLGPCTFTIVEQDSNHNGPFFLGRFLESLHYYSAIFDSLEECMPRDSQQRMKIEGAYFAEEICNIVAYEGPDRIERHERAEKWRRQLGRAGFQVMPLKCTSQARMYLSVYDCDGYTLSSEKGCLLLGWKGRPIVMKKPAREARRSGGSRDHAKKKRQTLRLKKRWRCNEVAVEGGRRERRSR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273842g00001 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 115 515 IPR005202 -
Stsc273842g00001 568 ProSiteProfiles GRAS family profile. 147 526 IPR005202 -
Stsc273842g00001 568 MobiDBLite consensus disorder prediction 523 547 - -
Stsc273842g00001 568 Pfam GRAS domain family 156 521 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273842g00001 Stsc-Chr273842 4755 7058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273842g00001 151 520 GRAS Transcription Factor Family AT3G03450 36.436 8.15e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc273842g00001 GRAS 1.6e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273842g00001 - - gmx:100814931 624.78