Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273834g00003 ATGGCTGAAACTCCAATCAAAAGAGGATTGAAATCCCTTTTTCACGGTTTGTCTGTGAAGCTAGGCATCAAAGACCCTAACATGTGGCAAAAAAGCCTCGAGACATTTCCATGGGGCCAGTTCTCAATGGCCGTTGTCCGAGGCAATCGTGAGATGGAAGATAGGAGCCAGGTCGAAGTGGGAGAAAATGCACTGTTTGTAGGCGTATACGACGGACATAGAGGTGACAGAGCTTCGTCTTTCATGGTTGATCATCTATTTGACAGGATCACGGCCCAAGCCTGGGATCATAATAGGTTAGATATGGAGAGGATTACCGCTGCTATCACTTACATGGAAAATCAATTCATTGATATGGTGAGAAATCACAAAGAAAATGAACCAAGTTTGTCAACAGTGGGCACCTGTGCATTAGTTGGGCTCTTACATGAAGGCAGACTTCACTCTGTTAGTGTGGGTGACAGTAAAGTGCTGCTCATTTCCCTGGAAAATGGGGAATACATTTTCCAGGAACTAACTACACAAAAGAATGTCAACACAAATCAGAGTCATAGAGAGGCATACATGACTGCTAATCCTGGTCGTGTTCTCTTCCAAGATGGTGTACATCGCGTTGCAGGAATTAGCAAGATATCTCAGAGTTTGGGAGATGCTTTTCTGAAACTAGAAGACTGCCTAGTTCCCGAGCACATGGTGCAACCTGATAGCTTACCTTATTTACACGCAAGTCCTGAATTTCAAACAAGGGTCCTTAATGAGAATCATAGATTTTTGGTTTTTGGCTCACATGGCTTTTGGGAACTTCTTGAGAATCAGCAAGTGGTAGACTTCGTAACTCAAAGTAGAAAAAGAAAGGGTATTGCAAAACGACTAGCCAAGGAAGCTGTAAATGTGGCAGCAGGTTTGGCCCGTCGCAGTTACAAGAAATTCATTCGTCAGACTGAGAGTAGGAGACCTTTACAGGATGACATTACTGTCATAGTAGTCTTCCTCGACCACATTAGGGAAGACCCGGACCCACATATGCGAGAAGTCTCGTTTAAACCACATGCTCCTATACTTTCATCTCACTTTACGAGGCTGCGCCATCACATGGCATATAATGCACGGGCTCAGGAACAGCGGACTGTCTTTCAAGAACTCCTATAG 1149 0.443 MAETPIKRGLKSLFHGLSVKLGIKDPNMWQKSLETFPWGQFSMAVVRGNREMEDRSQVEVGENALFVGVYDGHRGDRASSFMVDHLFDRITAQAWDHNRLDMERITAAITYMENQFIDMVRNHKENEPSLSTVGTCALVGLLHEGRLHSVSVGDSKVLLISLENGEYIFQELTTQKNVNTNQSHREAYMTANPGRVLFQDGVHRVAGISKISQSLGDAFLKLEDCLVPEHMVQPDSLPYLHASPEFQTRVLNENHRFLVFGSHGFWELLENQQVVDFVTQSRKRKGIAKRLAKEAVNVAAGLARRSYKKFIRQTESRRPLQDDITVIVVFLDHIREDPDPHMREVSFKPHAPILSSHFTRLRHHMAYNARAQEQRTVFQELL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273834g00003 382 ProSiteProfiles PPM-type phosphatase domain profile. 40 331 IPR001932 -
Stsc273834g00003 382 Gene3D - 27 337 IPR036457 -
Stsc273834g00003 382 PANTHER PROTEIN PHOSPHATASE 34 329 IPR015655 GO:0004722|GO:0006470
Stsc273834g00003 382 CDD PP2Cc 41 331 IPR001932 -
Stsc273834g00003 382 Pfam Protein phosphatase 2C 64 299 IPR001932 -
Stsc273834g00003 382 SUPERFAMILY PP2C-like 34 333 IPR036457 -
Stsc273834g00003 382 SMART PP2C_4 30 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273834g00003 Stsc-Chr273834 5578 7507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273834g00003 28 333 PP2C-type Phosphatase Gene Family AT5G06750 35.625 1.18e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273834g00003 K01102 - aip:107628075 256.144