Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273804g00003 ATGCTAGCAAACAGGCCAACATCTAGATGGATACATAAGATCATGAAAGATCTAAACACCGAAATCGCATGCATTCGTTTAGGCAACATTCATGTCATTCCACTCACTAGTCCTGAAATTGCTTGCGAAATAATGACAAAACAAGATTCAATTTTCGCATCTAGGCCGAGAAATTGGTCAAGCGAACATGTCTCGGGAGGGTTCTTGAGTACAATACTCGTCCCCTATGGAGAACAATGGAAGAAAATGAAGAAAATCATGTCCAATGAATTGGTGTCTCCAAAAAGACTTCAATGGCTACAACTCAAGAGGGTGGAGGAATCTGACAATCTTGTCCGCTATGTTTACAATCAATGCAACAAGAATGGTGGTGGCCTTGTGGATGTGAGGTTGGTTTTCAATGCAAGGCACTTTGGTAAAGGAAGGGAAGATGGAGGACCCGACTTTGAGGAGGTGGAACATATAGATGCAATTTTCACTGTTTTGAGATACCTCTTTGCATTCTCCATCTCTGATTTCGTTCCATGCTTGAGAGAGCTTGACTTGGATGGTCATAAGAAGGAGTTGAAGAAGGCCACTAAGTTGATAACGAAGTATCATGACCCCCTAATAGAAGATAGGATTCATCAATGGAACAGTGGCAAAAGGACACATCAAGAGGACTTGCTTGACGTTCTGATCTCATTGAAAGATGTGAATGATAATCCCCTTTTGACTCTTGATGAAATTAAGGCTCATATCATGGATATAATGATCGCAACCGTAGACAATCCATCAAATGCCTTTGAATGGGCACTCGCCGAGATGCTAAATCAACCGGAGACACTCCGAAAGGCAACGGAAGAATTAGATAGCGTAGTTGGGAAAGAACGCCAAGTGCAAGAATCAGACATTCCAAAACTCAACTACGTGAAGGCATGCGCAAAAGAAGCGTTTCGTCTCCATCCGATCGAAGACATCAATGCTGCCCATCTTTCCATGGAGGACACTTTTGTTGCCAACAACACATACTTCATTTCAAAGAGTAGCTATGTAATTCTAAGGCGTCAAGGAATCGGACAAAATCCAAGAATATGGAAAGAAACGTTTAAATTTAAACCTGAACGTCATTTAGAAAAAGATCACGATGGGTTTAAGAATTTGAGTTTAAATGAGCCAAGTTTAAAATTGATCACATTTGGCAAGGGACGACGTTCATGTCCTGGGATGGTGCTTGGTTCTTCAATGACGATTATGTTATTTGCTAGGATGTTGCATGGTTTCGAATGGTGTATGCCATCCGATGAGACAACCATTGACCTCTCCGAATCACAACGAGGTACCACAAAAGCAAAGCCACTCATTGCTCATGCAATGCCGCGATTACCAGAAGAGGCTTATCAAATTTCTTAA 1392 0.4159 MLANRPTSRWIHKIMKDLNTEIACIRLGNIHVIPLTSPEIACEIMTKQDSIFASRPRNWSSEHVSGGFLSTILVPYGEQWKKMKKIMSNELVSPKRLQWLQLKRVEESDNLVRYVYNQCNKNGGGLVDVRLVFNARHFGKGREDGGPDFEEVEHIDAIFTVLRYLFAFSISDFVPCLRELDLDGHKKELKKATKLITKYHDPLIEDRIHQWNSGKRTHQEDLLDVLISLKDVNDNPLLTLDEIKAHIMDIMIATVDNPSNAFEWALAEMLNQPETLRKATEELDSVVGKERQVQESDIPKLNYVKACAKEAFRLHPIEDINAAHLSMEDTFVANNTYFISKSSYVILRRQGIGQNPRIWKETFKFKPERHLEKDHDGFKNLSLNEPSLKLITFGKGRRSCPGMVLGSSMTIMLFARMLHGFEWCMPSDETTIDLSESQRGTTKAKPLIAHAMPRLPEEAYQIS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273804g00003 463 PRINTS E-class P450 group I signature 242 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 PRINTS E-class P450 group I signature 400 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 PRINTS E-class P450 group I signature 348 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 PRINTS E-class P450 group I signature 305 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 PRINTS E-class P450 group I signature 262 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 PRINTS E-class P450 group I signature 390 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 SUPERFAMILY Cytochrome P450 8 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 393 402 IPR017972 GO:0005506|GO:0016705
Stsc273804g00003 463 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 462 - -
Stsc273804g00003 463 Pfam Cytochrome P450 12 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273804g00003 463 Gene3D Cytochrome P450 1 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273804g00003 Stsc-Chr273804 4690 9874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273804g00003 4 460 Cytochrome P450 AT5G05260 49.789 7.12e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273804g00003 - K14984 adu:107486438 719.539