Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273785g00001 ATGTGCAAATCCAAAAAGAGCACCAACGCCGTACAACCGATGAACAGAAACAGAAACAGAACCCAACCTCGCCGATCAACCTCCACCTCTTCATCTTCAGCACCACCACCACCACCACCCGTGAACAACAACTACCCGTCTTCCTCCTCTGAAGTTGCCATCACCGAATCAAGAAGCTACGTCTTCAACAACAAAGATTACAACTATTCCTCCCAATCCTATTCCATTTCAAGCAGTGTTGCCTCCCTCTCAAGCCTCAAAAACACGCTCCCTGAAAACCCTCACATCTACGACATCTCCGAGATCGCCGCCGCAACTTCCAATTTCACCTCCGAATCGCACTGCCGCCTTTCCAATTCCTCCTGGCGATGCTCCCTCAGGGACAGAGGTGTTGTTGTTTTTCAGCGCAAGTTTCGCAACCACATGGACCTCCCGGAGCTCCGCCACCGTCTCGCATTAATCTGCCGGAGCCACCACAGTAGTCTTGTCAAGCTCCTTGGTGCTTCCGTCTCCGGCAATTACATCTATCTGGTTTATGAATTTGTTCCCGGAGCTAGCCTCGCTGATTGCCTACGCAGCCGCCGGAACCCTAGCTTCACGAACTTGCCGACGTGGATGTCGAGGATGCAGATCGCATCCGATGTCGCTCACGGACTCGATTATATTCACAATTTCTCTGGATCCGATTCCTGTGACGGTTTTGGATCGGGATTCGTGCATAACCACATCAAGAGCTCAAGCATCGTGGTGGCGGAGGCGGAAGACGGTGTCCTTCACGGCAAGATCTGCCACTTCGGTACCTCCGATCTCTGCGGCGAGGCCGTCGATTGCGGTTCCAAAGGCTCCTCCGAGAAATTGAGGAGGTCTCGAAGCCGAACGGTGAAGTTTGAGGGGACGAGAGGGTACATGGCGCCGGAATTTCAGATCACCGGCGTTGCGACGCAGAAGACCGACGTGTACGCGTTCGGAGTGGTGGTTCTGGAGCTGCTGAGTGGCGATGAGGCGTTGAGGTTTGAATTTGACGGAGATGACGGCGAATCTTATCGGAGAGTGAGTGTGGTGGATTCCGCAAGGGTTATTGCGGAGGAGCACGGCGGCGCGAGGAAGTGGGTGGATAAGAGACTTAGAGATTCGTTTCCCGTTGACGTGGCAGAGAAGATGATTCGGGTCGGGTTAGAATGTGTTGGAGATGATCCGAATGAAAGGCCCGATATGGGCCGGGTCGCGGTTGAAGTTTCGAAGTTGTATTTGGAATCTCGTAAGTGGGCTGAGAAAATGGGAAACATTATTGACTTTACGGTCTCATTGGCGCCTCGGTGA 1320 0.5318 MCKSKKSTNAVQPMNRNRNRTQPRRSTSTSSSSAPPPPPPVNNNYPSSSSEVAITESRSYVFNNKDYNYSSQSYSISSSVASLSSLKNTLPENPHIYDISEIAAATSNFTSESHCRLSNSSWRCSLRDRGVVVFQRKFRNHMDLPELRHRLALICRSHHSSLVKLLGASVSGNYIYLVYEFVPGASLADCLRSRRNPSFTNLPTWMSRMQIASDVAHGLDYIHNFSGSDSCDGFGSGFVHNHIKSSSIVVAEAEDGVLHGKICHFGTSDLCGEAVDCGSKGSSEKLRRSRSRTVKFEGTRGYMAPEFQITGVATQKTDVYAFGVVVLELLSGDEALRFEFDGDDGESYRRVSVVDSARVIAEEHGGARKWVDKRLRDSFPVDVAEKMIRVGLECVGDDPNERPDMGRVAVEVSKLYLESRKWAEKMGNIIDFTVSLAPR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273785g00001 439 PANTHER OS09G0572100 PROTEIN 1 439 - -
Stsc273785g00001 439 MobiDBLite consensus disorder prediction 1 31 - -
Stsc273785g00001 439 Gene3D Phosphorylase Kinase; domain 1 70 181 - -
Stsc273785g00001 439 SUPERFAMILY Protein kinase-like (PK-like) 124 411 IPR011009 -
Stsc273785g00001 439 ProSiteProfiles Protein kinase domain profile. 96 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc273785g00001 439 MobiDBLite consensus disorder prediction 1 50 - -
Stsc273785g00001 439 Gene3D Transferase(Phosphotransferase) domain 1 183 432 - -
Stsc273785g00001 439 Pfam Protein kinase domain 149 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273785g00001 Stsc-Chr273785 1451 2770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273785g00001 92 427 Receptor kinase-like Gene Family AT1G51940 31.195 1.36e-41 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc273785g00001 Pkinase 2.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273785g00001 - - mtr:11414164 549.666