Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273784g00001 TGGATACTTCATGATTGGAGTGATGAACAATGCATGAAGGTGTTGAAGAATTGCCACAAGGCCATCCCTGGAGATGGAAAAGTGATAATTGTAGACACAATGGTTCCGGTTTTGCCGGAGAATACAACAGCTGCTAAGGTGGTTGCTTTCAAATCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACAAAGCATGAGTTCATTCAATTGGCCAATGCTTCTAGATTTTCTGCCATCAAATTTGTGTGCTCTGTTTCTGGATTTTGGGTTATGGAGTTCTACAAGTAG 300 0.4033 WILHDWSDEQCMKVLKNCHKAIPGDGKVIIVDTMVPVLPENTTAAKVVAFKSDLLMMTQNIGGKERTKHEFIQLANASRFSAIKFVCSVSGFWVMEFYK 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273784g00001 99 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 99 IPR016461 GO:0008168
Stsc273784g00001 99 Gene3D Vaccinia Virus protein VP39 1 89 IPR029063 -
Stsc273784g00001 99 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 98 IPR029063 -
Stsc273784g00001 99 PANTHER O-METHYLTRANSFERASE 1 90 IPR016461 GO:0008168
Stsc273784g00001 99 Pfam O-methyltransferase domain 1 80 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273784g00001 Stsc-Chr273784 545 844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273784g00001 2 99 Monolignol Biosynthesis Gene Families AT1G21100 48.980 1.90e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273784g00001 K13066 - adu:107473094 175.252