Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273638g00002 ATGGCAGAAAAACGCAGTGACTTGAAGCTTTTGAGTGCGTGGTTCAGTCCAATGGCCTTAAGGGCGAAGATTGCTCTTAACATCAAAGGATTGGAATATGAGAACATTGAAGAGGACTTTAACTCCAAAAGTGACCTTCTTCTCCGTTCGAACCCTGTGCACAAGAAAATCCCAGTTCTAATTCATGGTGAGAAATCCATATGTGAATCCTCAATCATAGTTCAATATATTGATGAGGTTTGGTCCAATAATGGTCCTGCTATCCTTCCTCAACATGCTTATGACAGAGCAATTGCTAGATTCTGGGTTTGCTATATTGATGAAAAGTTATTTGTTTGCGCGAAGAACATTCAAGATGCTGGTGAAAATGAAGAGAAAAAGAAGCCACACTTTGATCAATTAGAGGAAGAAATGCTTGTGAGGTTGGAAGAGGCATTCAAAAGATGCAGTGAAGGAAAGCCCTTCTTTGGAGGCAACAACATTGGACTCATTGACATTGCCTTAGGGAGCTTCCTCCCTGTTTTAGGTCTCATAGAAGAGATTAATGGAAGGAAGGTCCTTGTGGAGGACAAGTTTCCGGGATTGGCGAATTGGGCTACAAATTTTGCTGTGAATTCGACTGTGACCGGGACTTTTCCTAAGATTGACAAGCTTATTTTGTTTGGCAAGTCTCTTCAATAA 681 0.4112 MAEKRSDLKLLSAWFSPMALRAKIALNIKGLEYENIEEDFNSKSDLLLRSNPVHKKIPVLIHGEKSICESSIIVQYIDEVWSNNGPAILPQHAYDRAIARFWVCYIDEKLFVCAKNIQDAGENEEKKKPHFDQLEEEMLVRLEEAFKRCSEGKPFFGGNNIGLIDIALGSFLPVLGLIEEINGRKVLVEDKFPGLANWATNFAVNSTVTGTFPKIDKLILFGKSLQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273638g00002 226 Gene3D - 89 226 - -
Stsc273638g00002 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 226 IPR010987 -
Stsc273638g00002 226 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Stsc273638g00002 226 CDD GST_N_Tau 8 81 - -
Stsc273638g00002 226 FunFam Glutathione S-transferase U9 89 226 - -
Stsc273638g00002 226 Gene3D Glutaredoxin 1 88 - -
Stsc273638g00002 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 216 IPR045073 -
Stsc273638g00002 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc273638g00002 226 SUPERFAMILY GST C-terminal domain-like 79 223 IPR036282 -
Stsc273638g00002 226 FunFam Glutathione S-transferase GSTU6 3 88 - -
Stsc273638g00002 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc273638g00002 226 SFLD Main.3: Omega- and Tau-like 4 224 IPR045073 -
Stsc273638g00002 226 CDD GST_C_Tau 93 221 IPR045074 GO:0004364|GO:0006749
Stsc273638g00002 226 Pfam Glutathione S-transferase, C-terminal domain 98 202 IPR004046 -
Stsc273638g00002 226 SFLD Glutathione Transferase (cytosolic) 4 224 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273638g00002 Stsc-Chr273638 7345 9416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273638g00002 6 225 Glutathione S-transferase Gene Family AT1G10370 53.182 7.37e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273638g00002 K00799 - gmx:547576 268.085