Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273630g00004 ATGGAGATCAAAAAAGCATGGTTTATCTGCAGTTACGGCGGTGAGATCAAGATCCAGGGATGCAACGAGCTCACCTACGTCGGCGGAACAAATAAGCTCGTTTCCGTTGACCGCAGAATTGACTTCGCAGGCATGCTTGCCGATATCTGTGGCTGCTGTCGCCTTGATTGCAACGGTTACAACTTCGAGTACAAGCTCCCCGACAGCAATTCTCTCGTCCCCGTGACCAACGACAGCGACCTCCACGACATGATGTTGTTGTTCGATCGACTCTACCGTGTTGACCCTGCACACTACCCGATAAGACTCTTCCTCTTCCCAAACCCTAAGGATGTCAAGAGAACAACTTGGAATTTTTGGAATTTTTTTTTAGAGTTTCAGGGTGGAAAGTTGTTTTTGACTAGACATGAAACATAA 417 0.4724 MEIKKAWFICSYGGEIKIQGCNELTYVGGTNKLVSVDRRIDFAGMLADICGCCRLDCNGYNFEYKLPDSNSLVPVTNDSDLHDMMLLFDRLYRVDPAHYPIRLFLFPNPKDVKRTTWNFWNFFLEFQGGKLFLTRHET 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273630g00004 138 SUPERFAMILY CAD & PB1 domains 22 111 - -
Stsc273630g00004 138 PANTHER OS05G0427100 PROTEIN-RELATED 6 111 - -
Stsc273630g00004 138 Pfam PB1 domain 24 107 IPR000270 GO:0005515
Stsc273630g00004 138 SMART PB1_new 19 108 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273630g00004 Stsc-Chr273630 11266 11854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273630g00004 2 110 MAP Kinase Kinase Kinase AT5G57610 32.143 6.31e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273630g00004 - - aip:107614910 128.642