Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273630g00002 ATGCCCCAGGGGAGGTTTGGCATCCTGGTCTCTTCAAGATACAAATATAGCTGGATCCCTAGAAGTTATGCGCAGTTACAAATAATTTTAAAACACTTTTCTACTTCCCTCTGTTTTCTACTTCTCCTAATGGACGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGATTTATATGGTCTCCCAGGAGTGGTGGTGAAACCCATGACCGTCCCGATGATTGGGCTTTTGAGGAGGGACCACATTCTGATTTCACTGGACCAAACTCTGGAAGTACAGCTTGTGTGGCTGTCATTCGAGGAAACAAACTTGTCGTTGCCAATGCTGGTGATTCTAGATGTGTATTATCAAGGAAGGGCCAGGCACACAATTTGTCTAAGGATCACAAGCCTGAGCTTGAGGCGGAGAGAGACAGGATTATAAATGCTGGTGGTTTCATCCAAGTTGGACGTGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGACATAGAATTCAAGCAGAACAAGGGTTTGCCTGCTGAGAAACAGATTGTGAGTGCTGAGCCAGACATAACTTCCGTTGAGCTTTGTGATGACGACGAGTTCCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCAAGCCAACAACTTGTGGACTTTATACATGCTAAGTTAAAGGAGGAGAACAAACTATCAGTGGTGTGTGAGATGGTATTCGACAGGTGCTTGGCACCAACAGCTGGTGGGGAGGGATGTGATAACATGACCATGATCTTGGTTCAGTTCAAAACTCCTTTGAATCCAAGTGCTTCTAATGCGGACCAGCCTCAGTCGTCCGCTGAACCGGCCGAAGCTGATCAAAGTTCAGAGCAAACAGAACAAAAGTGA 927 0.4531 MPQGRFGILVSSRYKYSWIPRSYAQLQIILKHFSTSLCFLLLLMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSGGETHDRPDDWAFEEGPHSDFTGPNSGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPELEAERDRIINAGGFIQVGRVNGSLNLARAIGDIEFKQNKGLPAEKQIVSAEPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHAKLKEENKLSVVCEMVFDRCLAPTAGGEGCDNMTMILVQFKTPLNPSASNADQPQSSAEPAEADQSSEQTEQK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273630g00002 308 CDD PP2Cc 90 275 IPR001932 -
Stsc273630g00002 308 ProSiteProfiles PPM-type phosphatase domain profile. 1 275 IPR001932 -
Stsc273630g00002 308 PANTHER PROTEIN PHOSPHATASE 2C 44 274 IPR015655 GO:0004722|GO:0006470
Stsc273630g00002 308 MobiDBLite consensus disorder prediction 279 308 - -
Stsc273630g00002 308 SMART PP2C_4 10 273 IPR001932 -
Stsc273630g00002 308 Gene3D - 26 276 IPR036457 -
Stsc273630g00002 308 MobiDBLite consensus disorder prediction 279 300 - -
Stsc273630g00002 308 Pfam Protein phosphatase 2C 102 260 IPR001932 -
Stsc273630g00002 308 SUPERFAMILY PP2C-like 100 276 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273630g00002 Stsc-Chr273630 858 4399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273630g00002 35 292 PP2C-type Phosphatase Gene Family AT2G25070 71.429 5.31e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273630g00002 K17499 - gmx:100776787 469.159