Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273630g00001 ATGGGGATATATCTGAGTGCGCCGAAAACAGAGAAGGCATCTGAAGATGGTGAGAACGACAAGCTTCGTTATGGCCTTTCTTCGATGCAGGGCTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTTATCCAGATTTGGATGATTCTACATCTTTCTTTGGTGTTTATGATGGGCATGGAGGCAAAGCAGTTTCCAAATTCTGTGCTAAGTATCTACATCAACAGATGCTTAAGCATGAAGCTTACTTAGCTGGAGATATAGGCACATCTTTACAGAAAACTTTCCTTAGAATGGACGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGATTTATATGGTCTCCCAGGAGTGGTGGTGAAACCCATGACCGTCCCGATGATTGGGCTTTTGAGGAGGGACCACATTCTGATTTCACTGGACCAAACTCTGGAAGTACAGCTTGTGTGGCTGTCATTCGAGGAAACAAACTTGTCGTTGCCAATGCTGGTGATTCTAGATGTGTATTATCAAGGAAGGGCCAGGCACACAATTTGTCTAAGGATCACAAGCCTGAGCTTGAGGCGGAGAGAGACAGGATTATAAATGCTGGTGGTTTCATCCAAGTTGGACGTGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGACATAGAATTCAAGCAGAACAAGGGTTTGCCTGCTGAGAAACAGATTGTGAGTGCTGAGCCAGACATAACTTCCGTTGAGCTTTGTGATGACGACGAGTTCCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCAAGCCAACAACTTGTGGACTTTATACATGCTAAGTTAAAGGAGGAGAACAAACTATCAGTGGTGTGTGAGATGGTATTCGACAGGTGCTTGGCACCAACAGCTGGTGGGGAGGGATGTGATAACATGACCATGATCTTGGTTCAGTTCAAAACTCCTTTGAATCCAAGTGCTTCTAATGCGGACCAGCCTCAGTCGTCCGCTGAACCGGCCGAAGCTGATCAAAGTTCAGAGCAAACAGAACAAAAGTGA 1089 0.4536 MGIYLSAPKTEKASEDGENDKLRYGLSSMQGWRASMEDAHAAYPDLDDSTSFFGVYDGHGGKAVSKFCAKYLHQQMLKHEAYLAGDIGTSLQKTFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSGGETHDRPDDWAFEEGPHSDFTGPNSGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPELEAERDRIINAGGFIQVGRVNGSLNLARAIGDIEFKQNKGLPAEKQIVSAEPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHAKLKEENKLSVVCEMVFDRCLAPTAGGEGCDNMTMILVQFKTPLNPSASNADQPQSSAEPAEADQSSEQTEQK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273630g00001 362 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Stsc273630g00001 362 PANTHER PROTEIN PHOSPHATASE 2C 17 328 IPR015655 GO:0004722|GO:0006470
Stsc273630g00001 362 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Stsc273630g00001 362 Pfam Protein phosphatase 2C 156 314 IPR001932 -
Stsc273630g00001 362 CDD PP2Cc 23 329 IPR001932 -
Stsc273630g00001 362 MobiDBLite consensus disorder prediction 333 354 - -
Stsc273630g00001 362 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Stsc273630g00001 362 Gene3D - 1 330 IPR036457 -
Stsc273630g00001 362 SMART PP2C_4 13 327 IPR001932 -
Stsc273630g00001 362 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Stsc273630g00001 362 MobiDBLite consensus disorder prediction 333 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273630g00001 Stsc-Chr273630 858 6698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273630g00001 1 346 PP2C-type Phosphatase Gene Family AT2G25070 74.063 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273630g00001 K17499 - gmx:100776787 645.58