Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273627g00002 ATGGAGTTTGTGAGAGCTCTCCCCATTTTGTTGGTTCTCTTCTTATTTGTTGTGTCAACTACCCAAGCCTTCAAATTCAACGTTGGTGGAAGCGCAGGGTGGGTTCCAAACCCTTCTCAGAGTTACAATCAATGGGCTGGGAGAAACAGGTTCCAAATCAATGACACTCTAGTTTTCAAATACAAGAAGGGTTCAGACTCAGTGCTAGAAGTGAAGAAAGAAGACTACGAAAAGTGCAACAAATCAAACCCAATAAAGAAATTCACCGACGGTAACACCGAATTCACCTTCGATCATTCAGGTCCATTCTACTTCATCAGTGGACAAGACGATAACTGTAAGAATAAAGCTCAGAAACTAATCGTCGTTGTCTTGGCGCCACGTGGCACTACACCAACACCACCAAAATCACCTTCACCAGCACCTTCATCTGGATCGCCGCCTGTGCCTGCACCGACACCAGCACCAACACCGGCCGGAAACTCTCCGGCGCCTTCCGTTTCACCTCCTAGCCCGACTCCGCCGACTTCACCGGCTCCGGCGGGCAAGTCACCTTCACCGTCACCGTCATCAGCTCCTGTAAGTGGACCTCCGGCCCCGACTCCGGCAGGTACAACGCCTTCTCCTTCAGCTGGCTCGCCGGGTCCTGCGACTGCACCTCCGCCTCCGACTACGGCGACACCTCCGGGAGCGGCTAGTCCGTCTGGTACAAATGAAACGGCTCCGGCACCGGGAAAACAAGGAAATAAAGCTTCGGCATCGAGTCCATCGAAATTCTTGGTGTATTCGGTTACCATTGTTGTTGCTGCTGTGTTCTTCGCTTGA 825 0.5188 MEFVRALPILLVLFLFVVSTTQAFKFNVGGSAGWVPNPSQSYNQWAGRNRFQINDTLVFKYKKGSDSVLEVKKEDYEKCNKSNPIKKFTDGNTEFTFDHSGPFYFISGQDDNCKNKAQKLIVVVLAPRGTTPTPPKSPSPAPSSGSPPVPAPTPAPTPAGNSPAPSVSPPSPTPPTSPAPAGKSPSPSPSSAPVSGPPAPTPAGTTPSPSAGSPGPATAPPPPTTATPPGAASPSGTNETAPAPGKQGNKASASSPSKFLVYSVTIVVAAVFFA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273627g00002 274 PANTHER BLUE COPPER PROTEIN 24 181 IPR039391 GO:0009055
Stsc273627g00002 274 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Stsc273627g00002 274 Gene3D - 22 128 IPR008972 -
Stsc273627g00002 274 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Stsc273627g00002 274 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Stsc273627g00002 274 MobiDBLite consensus disorder prediction 131 229 - -
Stsc273627g00002 274 MobiDBLite consensus disorder prediction 127 257 - -
Stsc273627g00002 274 FunFam Early nodulin-like protein 1 23 129 - -
Stsc273627g00002 274 MobiDBLite consensus disorder prediction 230 257 - -
Stsc273627g00002 274 CDD OsENODL1_like 24 125 IPR041846 -
Stsc273627g00002 274 PRINTS Proline rich extensin signature 126 138 - -
Stsc273627g00002 274 PRINTS Proline rich extensin signature 180 201 - -
Stsc273627g00002 274 PRINTS Proline rich extensin signature 163 175 - -
Stsc273627g00002 274 PRINTS Proline rich extensin signature 142 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273627g00002 Stsc-Chr273627 5892 7429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273627g00002 9 192 Phytocyanin Superfamily AT5G53870 49.738 8.45e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273627g00002 - - gmx:100795901 193.356