Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273602g00002 GACTCTCTCAAGTTTGATCCTAATGTTGCTGTTCCAGAACTCAAGGATGATCAGGTTCTCATTAAGGTTGGGGCTGCAGCTCTTAACCCTGTTGATTATAAGAGGGCCCTTGGAAATTTCAAGAACTCCGACTCTTCTTTACCGACTTGCCCCGGCTATGATGTTGCGGGTGTGGTAGTGAAAGTGGGAAGCCAAGTGAAGAAGTTCAAAGTTGGAGATGAAGTGTACGGTGACATCAATGAGAATGCATTGAACAATCCAAAGGCTATTGGGTCACTCGCAGAAGTTTCTCTTTCTCCCCAACAATCTATCCTTGTTCTTGGAGGTGCTGGTGGAGTTGGAACTCATGTTGTTCAGCTTGCGAAGCATGTGTTTGGGGCATCTAAGGTAGCAGCCACAGCCAGCACTGCCAAATTGGAATTATTGAGAAATTTGGGAGCAGACTTGCTTATTGACTATACCAAGCTCAACTTTGAAGATCTGCCAGAAAAATTTGATGTAGTCTTCGATGCAGTAGGTCAAAATGAGAGGGCACTGAAAGCTATAAAAGAAGGGGGAAAAGTTGTGACAATAGTAGAGCCTGAAATTCCTCCAGCAATTTGGTACTTACTCAATTCAGAGGGTGCTGTGTTGGAGAAATTAAAACCTTACTTGGAGAGTGGGAAGATCAAGCCAATATTGTACCCTAAAAGCCCTTTTCCATTTTCTAATGCTGTGGAAGCATTTGCCTACTTGAAGACTCATAGAGCCACCGGCAAAATTGTCATACACCCCATGCCATGA 783 0.4393 DSLKFDPNVAVPELKDDQVLIKVGAAALNPVDYKRALGNFKNSDSSLPTCPGYDVAGVVVKVGSQVKKFKVGDEVYGDINENALNNPKAIGSLAEVSLSPQQSILVLGGAGGVGTHVVQLAKHVFGASKVAATASTAKLELLRNLGADLLIDYTKLNFEDLPEKFDVVFDAVGQNERALKAIKEGGKVVTIVEPEIPPAIWYLLNSEGAVLEKLKPYLESGKIKPILYPKSPFPFSNAVEAFAYLKTHRATGKIVIHPMP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273602g00002 260 SMART PKS_ER_names_mod 1 256 IPR020843 GO:0016491
Stsc273602g00002 260 SUPERFAMILY GroES-like 8 256 IPR011032 -
Stsc273602g00002 260 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 99 259 IPR044626 GO:0016628
Stsc273602g00002 260 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 199 IPR036291 -
Stsc273602g00002 260 CDD MDR_like_2 9 256 - -
Stsc273602g00002 260 Gene3D - 3 87 - -
Stsc273602g00002 260 Gene3D - 92 203 - -
Stsc273602g00002 260 Pfam Alcohol dehydrogenase GroES-like domain 17 119 IPR013154 -
Stsc273602g00002 260 Gene3D - 204 259 - -
Stsc273602g00002 260 Pfam Zinc-binding dehydrogenase 145 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273602g00002 Stsc-Chr273602 7578 8861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273602g00002 41 125 Monolignol Biosynthesis Gene Families AT1G72680 27.957 6.17e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273602g00002 K18980 - fve:101294385 361.303