Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273591g00001 ATGCTAAATCAACCAAAAATACTTCAAAAAGCTATTGAAGAATTGGACAACGTGGTAGGAAGAGAGAGGTTAGTGCAAGAATCTGATATTCCAAAGCTTAACTATGTAAAAGCATGTTTAAGAGAAGGTTTTCGCCTTCACCCAATTGTAGACTTCAATGTTCCTCATGTTTCAATGGAAGACACCATTGTTGCCAATTACTTCATCCCAAAGGGTAGCCATGTTCTTATCAGGAGACAAGGTATTGGCCATAACCCTAGAGTTTGGGATGAGCCATTGAAATTCAAACCTGAAAGACATTTGAAGAAAGATGGGCGTGAATTGACCTTGTCTGAGCCAAATTTGGAGTTGTTCACATTTGGCACTGGAAGAAGAGGTTGCCCTGCAAGCACACTTGGGACTACAGTAACTGTAATGCTCTTTGCAAGGTTGGTTCATGGATTCACTTGGATTCCGCCTCCTAATGAACCAATCATTGATCTCTCTGAACTTGAAAATATCACTATGAAAGCTAAGCCGTTAGTTGCATTGGGAAAGCCTAGATTACCTGCCAAAAGAGTGTGTTCAAGATCTGATAATTCAGATCTCCATCAACCTTGTAGCTGCATCCTCAACATGGTATTAGAGCTTGAAACCGATCTGCCATGGTTTTCCTAA 657 0.4064 MLNQPKILQKAIEELDNVVGRERLVQESDIPKLNYVKACLREGFRLHPIVDFNVPHVSMEDTIVANYFIPKGSHVLIRRQGIGHNPRVWDEPLKFKPERHLKKDGRELTLSEPNLELFTFGTGRRGCPASTLGTTVTVMLFARLVHGFTWIPPPNEPIIDLSELENITMKAKPLVALGKPRLPAKRVCSRSDNSDLHQPCSCILNMVLELETDLPWFS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273591g00001 218 Gene3D Cytochrome P450 1 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273591g00001 218 Pfam Cytochrome P450 1 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273591g00001 218 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Stsc273591g00001 218 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 2 185 - -
Stsc273591g00001 218 SUPERFAMILY Cytochrome P450 1 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273591g00001 218 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273591g00001 218 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273591g00001 218 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273591g00001 218 PRINTS E-class P450 group I signature 78 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273591g00001 Stsc-Chr273591 488 1389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273591g00001 1 183 Cytochrome P450 AT4G39950 59.563 5.08e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273591g00001 - - ahf:112723966 313.538