LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc273514g00004	ATGGCAGATGAAAAGCAACCCCCATTGATGAACGGTGGATATGGCCCTTTAACTCCTCCACCATACAATCAACACCGTTCAAGAAACTGCCTTTGCTGCTTCTTCAAGGTTCTCATAACACTCATAATCCTATTAGGCCTTGCATCCCTTATTTCCTGTTTAATACTCCGTCCAAGACCCTTAAAATTCTCTGTCACAAATGCAAACCTCACACAATTCAATTACAATTCCGACAAAAAAACCTTAGACTACAACCTTGTACTAAATTTCACTGCCCGGAACCCTAACAAAAAGCTTGGCCTTTACTATGATTATGTTGAGGCCAATGCATTCTACCAAGATGTATGGTTTTCTCTAATTGATGTCATCAATTGGGAGAATTCGTTTAGACAATCCCCAAAGAGTACCATTGAAATGAGTGGTGTGTTCAAGGGTCAACAAGTTTTGTTTCTTGATGAAAGTCAACGCTCTCAGTTTGACCTAGAGAAGAATAATCATGGGGTGTTTAATATTTTTGTGGGACTTGATTTAAAAATTAGGTATAAGCTTGGTAGAATGACTGTTACTAAATCAAAGTCTAAGGCTAAGTGTCCGATTAAGGTTGCTTTGAGTGGTGATGGGAAAATAGTGTCACCATTTGAGCCCATTGAATGTGATATCGATGTCAAGGGGTGA	675	0.3911	MADEKQPPLMNGGYGPLTPPPYNQHRSRNCLCCFFKVLITLIILLGLASLISCLILRPRPLKFSVTNANLTQFNYNSDKKTLDYNLVLNFTARNPNKKLGLYYDYVEANAFYQDVWFSLIDVINWENSFRQSPKSTIEMSGVFKGQQVLFLDESQRSQFDLEKNNHGVFNIFVGLDLKIRYKLGRMTVTKSKSKAKCPIKVALSGDGKIVSPFEPIECDIDVKG	224

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc273514g00004	224	PANTHER	OS05G0367900 PROTEIN	30	208	IPR044839	GO:0098542

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc273514g00004	Stsc-Chr273514	5688	6362	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc273514g00004	55	204	SNARE and Associated Proteins	AT1G32270	27.333	1.01e-12	64.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc273514g00004	-		-	gmx:100807701	198.364