Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273514g00003 ATGGCTGAAAATAAGCAATCCCAATTGAATGCCTCATACCATGGCCCTTCAATTCCTCCAAATAGAAACTACCTTAGAACAACAAGAAGAAGAAATTGCTGTTGCCGCATTTTCAACATCTTCTGGAAGATTCTACTCTCAATCATAACCCTAATTGTTCTTTCATTCATCATATCCCTTATCTTAGTCCAACCGAGACCCTTCAAATTCTATGTCACACAAGCAAATCTCACACAATTCAACTACACTAACACTAGTACATTATTATTACACTACAACCTTGTACTAAACTTCACCTCACATAACCCAAACAAAAAGCTAGGAATCTACTATGACAAGGTTGAGGGCAATGTGTTCTACCAAGGTTATAGATTCTCCACCATTGATGTCATCACGTGGATGAATTCTTTCAGACAAGATTCTAAGCATACGGATGGGATGAGTGGTGTGTTCAAGGGGACAAAAGTTTTGGTTCTTGGCAAAAGTCAACGCTCTAAGTTTGACCAAGATAAGAGAGATGGGGATTTTGATATTTATGTGGAGCTGTATTTTGATATAAGGTTTAGGCTTGGTCATTTTATATTTAACAATATTAACTCCAAAGCTACGGTTAAGTGTGGGATTAAGGTTCCTTTGAGTGGTTCTAATGGGGAAGTGTTGGGTGCTAGATTTGAGCCAAAGAATTGCAATGTTAATGTGAAGTGGGTTTAG 711 0.3783 MAENKQSQLNASYHGPSIPPNRNYLRTTRRRNCCCRIFNIFWKILLSIITLIVLSFIISLILVQPRPFKFYVTQANLTQFNYTNTSTLLLHYNLVLNFTSHNPNKKLGIYYDKVEGNVFYQGYRFSTIDVITWMNSFRQDSKHTDGMSGVFKGTKVLVLGKSQRSKFDQDKRDGDFDIYVELYFDIRFRLGHFIFNNINSKATVKCGIKVPLSGSNGEVLGARFEPKNCNVNVKWV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273514g00003 236 PANTHER OS05G0367900 PROTEIN 33 212 IPR044839 GO:0098542
Stsc273514g00003 236 Pfam Late embryogenesis abundant protein 98 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273514g00003 Stsc-Chr273514 3584 4448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273514g00003 62 223 SNARE and Associated Proteins AT1G32270 30.061 3.76e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273514g00003 - - gmx:100794249 220.32