Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273439g00005 ATGAGCTTTTTGGAGTTTGGGTGTTTGATTGCAGTTCTATGTGGTCTTCTTGTGTCTCTGAAAGCTGAGATTTACATAGTAACTGTTGAGGGTGAACCTGTCATTAGTTATGCAGGTGGAATTGATGGCTTTGAAGCTACTGCTGTTGAATCTGACGAGAAGATTGATACCAATAGTGAATTGGTTACTTCATATGCTCACCATCTTGAGAAAAAACATGATATGCTTCTGGGGATGCTGTTTGAACCTGGAACATACAAGAAACTCTACAGCTATCGGCATCTGATAAATGGGTTTGCTGTTCATATTTCCCCAGAACAGGCAGAAACTCTAAGACATGCACCCGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTCACAACACATACGCCGCAGTTTCTTGGGCTTCCAACTGGAGTGTGGCCAACAGGAGGCGGCTTTGACCGGGCCGGAGAAGACATTGTGATTGGATTTGTGGATTCAGGAATCTATCCTCACCACCCAAGCTTTGCAACTCATAACACGGAACCATATGAGCCAGTTCCAAAGTACAGAGGAAAATGTGAGGTTGATCCAGATACTAAAAGAAGCTACTGTAATGGGAAGATTGTTGGAGCACAACATTTTGCCCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTCGCATCTCCTCTAGATGGAGATGGACATGGAAGTCATACAGCCTCTATAGCTGCTGGAAATAATGGAATTCCTGTAAGGATGCATGGCCATGAATTTGGTAGAGCTAGTGGAATGGCTCCTCGTGCCAGAATTGCTACGTACAAGGCACTCTACAGATTATTTGGAGGATTTGTGGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCGAACAGTCCTCCAGCAGCCACCAAAACCACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAAACAATGGTTTCATATAGTCCATGGATAGCCTCTGTAGCAGCTGCAATTGATGATCGTAGATACAAAAACCATTTGACCCTTGGAAATGGAAAAGTCTTAGCTGGAATCGGGTTGTCACCTGCTACACATTTAAATGAAACATACACACTGGTTGCTGCAAATGATGTGCTGCTGGATTCTTCAGTGATGAAGTTCACCCCCACAGACTGCCAGAGACCAGAACTTCTAAACAAGAGACTGATACAGGGCAATATTCTTCTCTGTGGATATTCTTTCAACTTTGTTTCTGGTTCAGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACGCTTCCCCAGAAACAAGATTTGACCCAGTTCCTGTTGGTGTTCCTGGGATTGTTATTGTTGATGTCAGGAACTCAAAGGAACTTGTAGATTATTATAATGTGGCTTTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTCCTCAAACCAGATATACTAGCACCCGGTTCTTTGATTTGGGCTGCTTGGAGTCCGAATGGTACCGATGAACCAAATTATGTTGGTGAGGGATTTGCCATGATATCTGGAACTAGCATGTCTGCACCACATATAGCTGGCATTGCTGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACAACATCAACATTAGATAGAGCAGGGAATCCACTTCTAGCTCAACAAGCTTCTGAAACAGGAACTACAAAGCTTGTCAAAGCTACTCCTTTTGATTATGGAAGTGGACATGTTGATCCAAGAGCTGCCTTGGATCCTGGGCTCATCTTTGATGCAGGATATGATGATTATCTAGGCTTCTTGTGTACAACACCAGGCATTGATGTTCATGAGATAAGGAACTACACTCACAAACCATGTAACAATACCATGGGCAAACCATCAAACTTAAACACCCCATCAATAACAATTTCACATCTTGTGAGAACTCAAACCGTCACTCGAACCGTCACGAATGTTGCCGAGGAAGAAACCTACGTGATCACAGCCAGAATGGATCCAGCTGTTGCCATTGATGTCAACCCTCCTGCAATGACCATAAGAGCAGGCGCATCACGCAAGTTCTCTGTGACTCTCACTGTTCGCAGAGTGACCGGAACCTATAGTTTCGGAGAGGTTCTAATGAAAGGCAGCAGAGGTCACAAGGTAAGGATCCCAGTGCTGGCGAATGGATACCCTCAATAG 2352 0.4409 MSFLEFGCLIAVLCGLLVSLKAEIYIVTVEGEPVISYAGGIDGFEATAVESDEKIDTNSELVTSYAHHLEKKHDMLLGMLFEPGTYKKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNTEPYEPVPKYRGKCEVDPDTKRSYCNGKIVGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIATYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLTLGNGKVLAGIGLSPATHLNETYTLVAANDVLLDSSVMKFTPTDCQRPELLNKRLIQGNILLCGYSFNFVSGSASIKKVSETAKALGAVGFVLCVENASPETRFDPVPVGVPGIVIVDVRNSKELVDYYNVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMSAPHIAGIAALIKQKHPHWSPAAIKSALMTTTSTLDRAGNPLLAQQASETGTTKLVKATPFDYGSGHVDPRAALDPGLIFDAGYDDYLGFLCTTPGIDVHEIRNYTHKPCNNTMGKPSNLNTPSITISHLVRTQTVTRTVTNVAEEETYVITARMDPAVAIDVNPPAMTIRAGASRKFSVTLTVRRVTGTYSFGEVLMKGSRGHKVRIPVLANGYPQ 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273439g00005 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Stsc273439g00005 783 FunFam Subtilisin-like protease SBT1.5 156 378 - -
Stsc273439g00005 783 Pfam Subtilase family 154 602 IPR000209 GO:0006508|GO:0008236
Stsc273439g00005 783 Gene3D - 657 780 - -
Stsc273439g00005 783 Pfam Fibronectin type-III domain 685 777 IPR041469 -
Stsc273439g00005 783 SUPERFAMILY Protease propeptides/inhibitors 86 126 - -
Stsc273439g00005 783 CDD PA_subtilisin_like 376 506 - -
Stsc273439g00005 783 ProSiteProfiles Serine proteases, subtilase domain profile. 123 640 - -
Stsc273439g00005 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 82 776 IPR045051 -
Stsc273439g00005 783 Pfam Peptidase inhibitor I9 25 127 IPR010259 -
Stsc273439g00005 783 SUPERFAMILY Subtilisin-like 129 644 IPR036852 GO:0004252|GO:0006508
Stsc273439g00005 783 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Stsc273439g00005 783 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Stsc273439g00005 783 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Stsc273439g00005 783 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Stsc273439g00005 783 Gene3D Peptidase S8/S53 domain 438 656 IPR036852 GO:0004252|GO:0006508
Stsc273439g00005 783 Gene3D Peptidase S8/S53 domain 130 388 IPR036852 GO:0004252|GO:0006508
Stsc273439g00005 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Stsc273439g00005 783 CDD Peptidases_S8_3 130 597 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273439g00005 Stsc-Chr273439 8026 12091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273439g00005 4 780 Subtilisin-like Serine Gene Family AT4G30020 76.507 0.0 1276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273439g00005 - - gmx:100787619 1382.85