Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273428g00001 ATGACAGTGGATCCTGAAGCCGAGAATGGAAATGAACAAACACACGAGTTTTTGTGTGATGTCGAGGAGGAGTATATTCCGAAGGTTGGAATGACATTTCAAACACTTGCTGAGGTTGGTTCGTTCTACAAAGAGTATGCCAAACGTGCAGGGTTCTCTACTAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATGAATCAACTCATAACATGTAACAGACAAGGACAATGGACATCCGAAGTACCTTACGTTGAGCAGATGAATCCTATCTGTGGTGCAAACTGTCCTGCACGAATTTATGCTCATGTAGTAAAGATAACTCGAATGTGA 342 0.4035 MTVDPEAENGNEQTHEFLCDVEEEYIPKVGMTFQTLAEVGSFYKEYAKRAGFSTKIRNTNRCKETKEEMNQLITCNRQGQWTSEVPYVEQMNPICGANCPARIYAHVVKITRM 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273428g00001 113 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 109 - -
Stsc273428g00001 113 Pfam FAR1 DNA-binding domain 41 106 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273428g00001 Stsc-Chr273428 7250 7779 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc273428g00001 FAR1 5.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273428g00001 - K17604 adu:110280446 112.464