Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273398g00001 ATGCCTTCACCTCCATCATCCTTCGCAACCATTCACCGTAACCGTATCGTCTTCCCTAGAAAATGGACAAGCAAGGAATACGCGACTGCATTCGCTCTCTTCTCCGTCACACTCATCCTCTTCTCCCTCACTCGCCGCCCCAACCTCCAAGAACCTTCTAGAATCTCTTCCTCCAATCGCTTTGTTCCCTTGACCCTCCTTTCAAATGCCACCCAAAGAGGCGCACTTTGCTTGGATGGGAGTGCCCCAGGGTACCACTTTCAGAAGGGATTCGGATCCGGGTATCAAAATTGGCTACTTCACATTGAGGGAGGTGGATGGTGTAATTCAGTAGCTTCATGTTCTCAGCGAAAAATGACTCCGTTAGGTTCGTCCAAGCACATGGAAAGAGAGGTTCCTTTTTCTGGGATATTAAGCTCTGATCCTTCTCTAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCTGGCCACCAAGAAAGTGATATTAAGCATGGAAGTGGGTTGTTCTTCAGAGGCCAGATCATTTGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAATGCAAAACAGGCACTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTTATACATTGTGATGACTTCCGGAAATATTTTTCGAAAGAGATAAATGTTAAATGTCTTGCTGATGCTGGCTTCTTCCTAGATGAGAAGGATGTTCTTGGAAAGAGTACAATGAGATCTTTCTATCATGATGTTGTTGAGCTTCAGGGTGTTGCCAGAAGTTTACACAAGGATTGCATTGCTAGAATTGAACCATTTAAGTGTTTTTTTCCATTAGAAATTGTTAAGAACATAAAGACTCCAGTGTTCTTTGTCCACCCAGGTTATGATTTCTGGCAAATACAAAATATTTTGGTACCTCATGGTTCAGACCCCCATGATTACTGGAAAAGCTGCAGATTGAACCTTGCCAATTGCAATGCTGATCAGTTTGATGTACTTCATGGTTTCCGTAGCTCATTGCTGAAGACTCTGAATGAGCTCCAGCAACGAAAGGAGATTGGAATGTTCATAAATTCCTGCTTTATTCATTGCCAGACATGGATGGGAGAGACATGGCACTCCCCCAATTCCCCTAAAATAAATGATAAGACAATTGCTGAAACTGTTGCTGATTGGTACTTTGACCGCAAAGTTATGAAGCTAATTGACTGCTCTTATCCATGCAACCCCACTTGCCGCAATATGGATTTCACCAGAAAATAG 1293 0.4316 MPSPPSSFATIHRNRIVFPRKWTSKEYATAFALFSVTLILFSLTRRPNLQEPSRISSSNRFVPLTLLSNATQRGALCLDGSAPGYHFQKGFGSGYQNWLLHIEGGGWCNSVASCSQRKMTPLGSSKHMEREVPFSGILSSDPSLNPDFFNWNKVKIRYCDGASFAGHQESDIKHGSGLFFRGQIIWEAIMDELLSIGMSNAKQALLSGCSAGGLATLIHCDDFRKYFSKEINVKCLADAGFFLDEKDVLGKSTMRSFYHDVVELQGVARSLHKDCIARIEPFKCFFPLEIVKNIKTPVFFVHPGYDFWQIQNILVPHGSDPHDYWKSCRLNLANCNADQFDVLHGFRSSLLKTLNELQQRKEIGMFINSCFIHCQTWMGETWHSPNSPKINDKTIAETVADWYFDRKVMKLIDCSYPCNPTCRNMDFTRK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273398g00001 430 PANTHER NOTUM-RELATED 40 425 IPR004963 GO:0016787
Stsc273398g00001 430 Pfam Pectinacetylesterase 57 408 IPR004963 GO:0016787
Stsc273398g00001 430 SUPERFAMILY alpha/beta-Hydrolases 184 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273398g00001 Stsc-Chr273398 2054 8014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273398g00001 20 394 Carbohydrate Esterase AT3G09410 58.225 9.90e-168 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273398g00001 K19882 - gmx:100792819 623.624