Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273351g00003 ATGGCGAGCCAAAGAATAGGAGAAGACACTGGTTTATCTGAGTCACTGCCCTCAACTCATCACCATGCCCCTACTTATGGTGTTTTTCAGGGAATCAACACTCCACAATCAACCTTAATGAATGAAGTGGGTGCGTTTGATTTTGGAGAGCTGCAAGAGGCAATTGTTCTGCAAGGAATCAAGACTAGAAATGATGAAGAAGCCAAAGCATCATGTATGATTCTTGGAGGTTGCAAGTCAGGAGGAGGGGAAGAAAGCACAGACTCAGGTGTGAACACCAACACCCTTTCAAGCAAATTAGAACCGGAACCCCATCATAATCATTTTGAATCACAAGATTCTCCAATTAGTAGCCACCACCAACAACACCAAGATCAAGAGGAGCAGCGGATTGCAATTTGTGATGGCTTAAGAAAAGGGCCATTGCCCCAACAAAAGAAAAAGGGAGCAAGTTCCACATCAGAGAAGCCAGTTGATGCAAAGACACTGAGGCGCTTAGCACAAAACAGGGAAGCTGCAAGGAAAAGCCGTCTAAGGAAAAAGGCTTATGTTCAGCAACTAGAATCTAGTAGATTGAAGCTTACTCAGCTGGAACAAGACCTTCAAAGAGCACGGTCCCAGGGAATGCTGTTAGGTTGTGGCAGTGCTGGTGGTACGAATATAAGCTCGGGAGGGTTGCAGTTTGACATGGAGTATGGAAGATGGTTAGAAGATGAAGAGAGGCATCTGGGGGAGATGAGGAGGGGGATAGAGGCGGGGATATCAGATGGGGAGCTGAGAGTGACAGTGGAGAGTTACATGAGGCATTACCAAGAGCTGTTTCGAGTGAAGGGGGAGGCAGCAAAGTGGGATGTGTTTCACATAATAAATGGAACATGGACATCTCCGGCAGAGAGGTGCTTCCTGTGGATAGGTGGTTTCAGGCCATCAGAGGTGATAGGGATGCTCATACACCACTTGGAGCCACTTGCAGAGCAGCAGATAATGGCCATGTACTCCCTCAGACACTCATCCCACCAGGCTGAAGACGCACTCTCTCAAGGACTTCATCAGCTTCACCACTCTCTCCTCCAAACCATCTCTCCTACTCCTCCTGACCCGGGCCCCCCTCCTCTAGCTCTCCAACACATGCTTTCTGCCATCTCCAAGCTTGCCAATCTTGAAGCTTTCCTCCGTCAGGCTGATAACTTGAGGCAGCAAAGTCTAGAACAATTGTGCCGATTACTAACAATTCGTCAAGCAGCTCGATGTTTTCTTGTGATTGGAGACTATTATGCTCGCCTTCGAGCCCTTAGTTCACTTTGGGCATCAAGGCCAC 1318 0.4803 MASQRIGEDTGLSESLPSTHHHAPTYGVFQGINTPQSTLMNEVGAFDFGELQEAIVLQGIKTRNDEEAKASCMILGGCKSGGGEESTDSGVNTNTLSSKLEPEPHHNHFESQDSPISSHHQQHQDQEEQRIAICDGLRKGPLPQQKKKGASSTSEKPVDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMLLGCGSAGGTNISSGGLQFDMEYGRWLEDEERHLGEMRRGIEAGISDGELRVTVESYMRHYQELFRVKGEAAKWDVFHIINGTWTSPAERCFLWIGGFRPSEVIGMLIHHLEPLAEQQIMAMYSLRHSSHQAEDALSQGLHQLHHSLLQTISPTPPDPGPPPLALQHMLSAISKLANLEAFLRQADNLRQQSLEQLCRLLTIRQAARCFLVIGDYYARLRALSSLWASRP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273351g00003 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 159 203 IPR004827 GO:0003700|GO:0006355
Stsc273351g00003 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 164 179 IPR004827 GO:0003700|GO:0006355
Stsc273351g00003 439 MobiDBLite consensus disorder prediction 1 20 - -
Stsc273351g00003 439 CDD bZIP_HBP1b-like 161 212 - -
Stsc273351g00003 439 Pfam bZIP transcription factor 160 202 IPR004827 GO:0003700|GO:0006355
Stsc273351g00003 439 MobiDBLite consensus disorder prediction 1 29 - -
Stsc273351g00003 439 MobiDBLite consensus disorder prediction 77 164 - -
Stsc273351g00003 439 ProSiteProfiles DOG1 domain profile. 225 438 IPR025422 GO:0006351|GO:0043565
Stsc273351g00003 439 SUPERFAMILY Leucine zipper domain 161 204 IPR046347 GO:0003700|GO:0006355
Stsc273351g00003 439 PANTHER TRANSCRIPTION FACTOR TGA9 105 439 - -
Stsc273351g00003 439 MobiDBLite consensus disorder prediction 120 134 - -
Stsc273351g00003 439 Pfam Seed dormancy control 242 316 IPR025422 GO:0006351|GO:0043565
Stsc273351g00003 439 MobiDBLite consensus disorder prediction 85 100 - -
Stsc273351g00003 439 SMART brlzneu 157 222 IPR004827 GO:0003700|GO:0006355
Stsc273351g00003 439 Coils Coil 180 207 - -
Stsc273351g00003 439 Gene3D - 160 211 - -
Stsc273351g00003 439 FunFam BZIP family transcription factor 160 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273351g00003 Stsc-Chr273351 10006 14586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273351g00003 141 439 bZIP Transcription Factor Family AT1G08320 62.876 2.43e-135 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc273351g00003 DOG1 1.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273351g00003 K14431 - gmx:778195 497.664