Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273335g00003 ATGGACTACCTTCCATTGCTTCTTCTAATGTCTTTTGTATGGATAAGCATTCACGTTCTAATCTCAAACTTAGTCACAAAAAAATCACCAAAATCACTCAAACTTCCACCAGGGCCTAAACCTTTTCCAATCATAGGAAACATCTTAGAATTTGGTAACCAACCTCATCAAGCACTTGCTGAGCTTTCTAAAACCTATGGACCAATAATGACTATGAAGCTTGGTAACATAACCACCATAGTTATTTCATCTCCACAATTAGCCAAAGAAATTCTCCATAAAAATGACCAAATCTTCTCCTATAGGACTATCCCTGACTCAGTTAGAGCTCTTGACCACCACAAATTTTCAATTGTATGGTTGCCACCAACAACTCAATGGCGGAGTCTTAGGAAATTTTGCGCGACCAAAGTGTTCTCGACACAAAACCTAGACTCGACACAGGATCTTCGACGAGAAAAGATTCGTGAGTTACTAGATTTTGTGAAGGAAAAAAGTGAAAAAGGAGAAACTTTAGATATTGGTGAGGTTTGCTTTACGACCGTGCTTAATTCCGTATCGAACACTTTTTTCTCTGTGAATCTGGCTCATTACAATTCTGATAAAAAATTACAAGAATTCAAAGATATCATTTGGGGTGTCATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTCTTTCCAATCTTTCGGTTGCTTGATCCGCAAGGTGCACGCACAAGATTGAAAGTTTACCTTGGAAAATTACTTAGTTTTTTGGATGGTCTTTTAGAAGAAAGATTGCAATCAAGAAAAGGGTTGGGAATGGGATCCAAAGATTGCAAAGATGTGTTAGATTCTGCGGCAGATATCCTTTTGGAAGGCGATTCACAAGTGACCAGATCTCATTTGCTACATTTATTTCTGGATTTATTTGTGGCCAGAATAGACACAACATCAAGCACAATAGAGTGGGCAATGGCAGAACTATTCCATAACCCTAAAAACATAGTAAAAGTTAGAGAAGAACTTGCACAAGTCCTTGGCAAAGGTGAACAACAACATCAACTTGAAGAATCACATATTTCAAAGCTTCCTTTTCTAAGAGCAATTGTCAAGGAAACCCTACGTTTGCATCCACCTGCCCCATTTTTAGTCCCTCACAGGGCAGAAAATGATGTTGAAGTATGTGGCTACTTGGTTCCAAAAAATGCTCAAATCCTAATAAATGTATGGGCTATGGGAAGAGATTCAAGTGTTTGGACAAACCCTAATGAATTCATGCCTGAAAGATTCTTGGAAAGTGAAATTGATTTTAAGGGCCAAGATTTTGAGCTAATTCCGTTCGGTGCCGGAAGAAGAATTTGTCCTGGATTAGCATTAGGGTTTAGGAGTATACACTTTGTGTTAGCTTCTCTTTTATTTGAATATGATTGGAAGCTCCCAAATAAGGTGAATTCAGAAGAGATGGATATGTCTGAGAAATATGGAATTACCATACACAAGGCACAACCTCTCCAAGTTATTCCTATTTCCATGCATAACAATGCCAAGTGA 1536 0.3841 MDYLPLLLLMSFVWISIHVLISNLVTKKSPKSLKLPPGPKPFPIIGNILEFGNQPHQALAELSKTYGPIMTMKLGNITTIVISSPQLAKEILHKNDQIFSYRTIPDSVRALDHHKFSIVWLPPTTQWRSLRKFCATKVFSTQNLDSTQDLRREKIRELLDFVKEKSEKGETLDIGEVCFTTVLNSVSNTFFSVNLAHYNSDKKLQEFKDIIWGVMEEAGRPNVVDFFPIFRLLDPQGARTRLKVYLGKLLSFLDGLLEERLQSRKGLGMGSKDCKDVLDSAADILLEGDSQVTRSHLLHLFLDLFVARIDTTSSTIEWAMAELFHNPKNIVKVREELAQVLGKGEQQHQLEESHISKLPFLRAIVKETLRLHPPAPFLVPHRAENDVEVCGYLVPKNAQILINVWAMGRDSSVWTNPNEFMPERFLESEIDFKGQDFELIPFGAGRRICPGLALGFRSIHFVLASLLFEYDWKLPNKVNSEEMDMSEKYGITIHKAQPLQVIPISMHNNAK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273335g00003 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 504 - -
Stsc273335g00003 511 CDD CYP76-like 63 503 - -
Stsc273335g00003 511 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Stsc273335g00003 511 Gene3D Cytochrome P450 21 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 FunFam Cytochrome P450 76C4 27 502 - -
Stsc273335g00003 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00003 511 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273335g00003 Stsc-Chr273335 11633 14805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273335g00003 8 504 Cytochrome P450 AT2G45550 48.509 1.64e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273335g00003 - - gmx:100779789 700.279