Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273335g00002 ATGGATTTTGCTCATTACACTTCTCATAAATCTCAAGAATTCAAGGATATCATTTGGGGTGCCATGGAAGAAGCTGGAAGGCCTAATGTTATGGATTTCTTTCCAATCTTTCGGTTGCTTGATCCACAAGACAAAACATCAAGCACAATAGAGTGGGCAATGGCAGAACTACTCCATAACCCTAAAAACCTAGTAATAGTTAGAGAAGAACTTGCACAACTCCTTGCCAAAGGTGAAAAACAACTTGAAGAATCACTTATTTCAAGGCTTCCTTTTCTAAGAGCAATTGTTAAGGAAACTTTACGTTTGCATCCACCTGCCCCATTTTTATTGCCTCACAGGCCTGAAAATGATGTTGAAGTATGTGGCTACTTGGTTCCAAAAGATGCTCAAATCCTAACCAATGTATGGGCCATGGGAAGAGATTCAAGTATTTGGACAAACCCTAATGAATTCATGCCGGAAAGATTTTTGGAAAGTGAAATTGATTTTAAGGGTCAAGATTTTGAGCTAATTCCGTTTGGTGCCGGAAGAAGAATTTGTCCTGGAGTAGCATTAGGGTTTAGGATTATACACTTTGTGTTAGCTTCTCTTTTATTTGAATATGATTGGAAGCTCCCAAATAAGGTGAATTCAGAAGAGATGGATATGTCTGAGAAATTTGGACTTACCTTACACAAGGCACAGCCTCTTCAAGTTATTCCTATTTCTATGCATAACAATAATTTCAAGTGA 735 0.3796 MDFAHYTSHKSQEFKDIIWGAMEEAGRPNVMDFFPIFRLLDPQDKTSSTIEWAMAELLHNPKNLVIVREELAQLLAKGEKQLEESLISRLPFLRAIVKETLRLHPPAPFLLPHRPENDVEVCGYLVPKDAQILTNVWAMGRDSSIWTNPNEFMPERFLESEIDFKGQDFELIPFGAGRRICPGVALGFRIIHFVLASLLFEYDWKLPNKVNSEEMDMSEKFGLTLHKAQPLQVIPISMHNNNFK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273335g00002 244 PRINTS P450 superfamily signature 41 58 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS P450 superfamily signature 95 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS P450 superfamily signature 172 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 174 183 IPR017972 GO:0005506|GO:0016705
Stsc273335g00002 244 Gene3D Cytochrome P450 39 238 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 SUPERFAMILY Cytochrome P450 11 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 Pfam Cytochrome P450 43 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS E-class P450 group I signature 181 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS E-class P450 group I signature 94 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS E-class P450 group I signature 50 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS E-class P450 group I signature 171 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 PRINTS E-class P450 group I signature 135 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273335g00002 244 FunFam Os10g0167200 protein 54 234 - -
Stsc273335g00002 244 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273335g00002 Stsc-Chr273335 4209 5342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273335g00002 44 236 Cytochrome P450 AT1G33720 56.477 2.24e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273335g00002 - - gmx:100809483 294.278