Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273326g00002 ATGTCGGCAGAGGCCGCATGCTCAACCGCTCTAGATGCGGCTCGAGCTGCCGTGTGCCGTGACAGCGCAGCCGCAGCACACCTAAAACTCATTTCTGTATTCACCATCTTCGCCACCAGCATGGTGGGGATGTCATCCCCGGTGCTGGTGGCACGATTCTTTAAAGCTAATCAATCACTCTATGACAAGGCTCTTGTTGTTATTAAGTGCTTCGCAGCCGGGGTCATCCTGGCCACGTCATTAGTCCACGTGATGCCAGACGCGTTCGACGCGCTAGCTGACTGCCAAGTGGCAACCAAGCACCCGTGGAAGGACTTTCCTTTCACGGGACTTGTGACATTAGTTGGCACAATCTTGGCACTCTTGGTTGACGTGGCAGCCAGCTCGCACGTGGAGCATCACGTGAGCTATAAGGCTTTGGAGGGAGAAGAGGAGAAGGAGTTAGTTGGAGAAGGCTACGGGGGTTGCGATGATGACGTGGAAAGGGTTGTTGTTAGGGTTGAAGAGGAAGTGGCGAGGTTGAAACAGAGGTTGGTGTCACAAGTGTTGGAAATTGGGATAATATTTCATTCGGTGATAATTGGAGTGACGATGGGAATGTCTCAGAATGTTTGCACTATAAGGCCACTCGTTGCTGCTTTGGCTTTTCATCAGATCTTTGAAGGAATGGGTCTTGGTGGTTGTGTTGCTCAGGCAGGGTTCAGATTTGGAACAATGGCATACATGTGCTTGATGTTCTCGGTGACAACACCAATGGGAATAATATTAGGGATGATTTTGTTCTCAGCAACTGGCTATGATGATAGTAACCCTAATGCATTGATCATGGAAGGGTTACTTGGTTCACTTTCTTCTGGGATTCTAATCTACATGGCTCTTGTTGATCTCATTGCACTTGATTTCTTTCACAACAAGCTTATGACCTCAAATCTGGGCTTGAAAAAAGTGTCCTTTCTTGCATTAACTCTTGGCTCTGCTTCAATGTCTCTTCTTGCACTTTGGGCTTAA 1008 0.4812 MSAEAACSTALDAARAAVCRDSAAAAHLKLISVFTIFATSMVGMSSPVLVARFFKANQSLYDKALVVIKCFAAGVILATSLVHVMPDAFDALADCQVATKHPWKDFPFTGLVTLVGTILALLVDVAASSHVEHHVSYKALEGEEEKELVGEGYGGCDDDVERVVVRVEEEVARLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFRFGTMAYMCLMFSVTTPMGIILGMILFSATGYDDSNPNALIMEGLLGSLSSGILIYMALVDLIALDFFHNKLMTSNLGLKKVSFLALTLGSASMSLLALWA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273326g00002 335 Coils Coil 157 184 - -
Stsc273326g00002 335 Pfam ZIP Zinc transporter 27 332 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc273326g00002 335 PANTHER ZINC/IRON TRANSPORTER 25 329 - -
Stsc273326g00002 335 NCBIfam ZIP zinc/iron transport family 16 335 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273326g00002 Stsc-Chr273326 628 2692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273326g00002 5 335 Inorganic Solute Cotransporters AT2G30080 65.805 1.86e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273326g00002 K14709 - qsa:O6P43_020371 457.218