Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273326g00001 ATGTCGGCAGAGGCCGCATGCTCAACCGCTCTAGATGCGGCTCGAGCTGCCGTGTGCCGTGACAGCGCAGCCGCAGCACACCTAAAACTCATTTCTGTATTCACCATCTTCGCCACCAGCATGGTGGGGATGTCATCCCCGGTGCTGGTGGCACGATTCTTTAAAGCTAATCAATCACTCTATGACAAGGCTCTTGTTGTTATTAAGTGCTTCGCAGCCGGGGTCATCCTGGCCACGTCATTAGTCCACGTGATGCCAGACGCGTTCGACGCGCTAGCTGACTGCCAAGTGGCAACCAAGCACCCGTGGAAGGACTTTCCTTTCACGGGACTTGTGACATTAGTTGGCACAATCTTGGCACTCTTGGTTGACGTGGCAGCCAGCTCGCACGTGGAGCATCACGTGAGCTATAAGGCTTTGGAGGGAGAAGAGGAGAAGGAGTTAGTTGGAGAAGGCTACGGGGGTTGCGATGATGACGTGGAAAGGGTTGTTGTTAGGGTTGAAGAGGAAGTGGCGAGGTTGAAACAGAGGTTGGTGTCACAAGTGTTGGAAATTGGGATAATATTTCATTCGGTGATAATTGGAGTGACGATGGGAATGTCTCAGAATGTTTGCACTATAAGGCCACTCGTTGCTGCTTTGGCTTTTCATCAGATCTTTGAAGGAATGGGTCTTGGTGGTTGTGTTGCTCAGAATTCCATATACACCACATTGATGCAAAGAACAAAATTGCATTGGCTTCCTCCACGGGTATGA 756 0.5066 MSAEAACSTALDAARAAVCRDSAAAAHLKLISVFTIFATSMVGMSSPVLVARFFKANQSLYDKALVVIKCFAAGVILATSLVHVMPDAFDALADCQVATKHPWKDFPFTGLVTLVGTILALLVDVAASSHVEHHVSYKALEGEEEKELVGEGYGGCDDDVERVVVRVEEEVARLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQNSIYTTLMQRTKLHWLPPRV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273326g00001 251 Coils Coil 157 184 - -
Stsc273326g00001 251 Pfam ZIP Zinc transporter 27 233 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc273326g00001 251 PANTHER ZINC/IRON TRANSPORTER 25 230 - -
Stsc273326g00001 251 NCBIfam ZIP zinc/iron transport family 16 234 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273326g00001 Stsc-Chr273326 628 2692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273326g00001 5 231 Inorganic Solute Cotransporters AT2G30080 60.833 4.37e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273326g00001 K14709 - gmx:100797310 288.885