Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273236g00001 ATGAAGATCAATAGAAAAGTAGTGTTTGTGCTATTTGCATTTGTCTTGTTTGTAGTAAGGGGGAATGCACAAGACACCCTTGTGCCTGCAATCATGACATTTGGTGACTCTGCTGTGGATGTTGGCAACAATGACTACCTGCCTACAATTTTCAAGGCTAATTACCCTCCTTATGGAAGGGACTTTCTCAACCATAAACCCACTGGCAGGTTTTGCAATGGCAAATTAGCTACTGATATTACAGCTGATACACTGGGATTTAAGAGTTATGCACCTGCATATCTTAGTCCACAAGCATCAGGGAAGAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCCTCTGGTTATGATGAAAAGGCTGCCATCTTGAATCATGCAATCCCATTGTCTTTACAGTTGAATTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGCAAGAAAGCAGCATCAATCATTAAGGATGCATTGTACTTATTGAGTGCTGGAAGTAGTGACTTTGTCCAAAATTATTATACTAATCCTTTGATCAACAAACTTGTCACCCCTGACCAGTATTCTTCATACCTAGTCAAATCATTCTCAAGTTTTGTTAAGGATTTGTATAAATTGGGAGCTAGGAAAGTTGGGGTGACTTCCCTTCCACCATTGGGTTGCCTACCTGCTGCAAGAACCTTGTTCGGATTCCATGAGAACGGTTGTGTCTCGAGAATCAACAATGATGCTCAAGGATTTAACAAGAAAATCAACTCGGCTGCGAAAAATCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTCGCGGAGGCGAGGAAAGGCTGCTGTGGTACTGGGATAGTTGAGACAACATCATTATTGTGCAATCCAAAATCACTAGGAACTTGCTCCAATGCAACTCAGTATGTGTTTTGGGACAGTGTCCATCCTTCTCAAGCTGCAAACCAAGTTCTAGCAGATACATTGATTGTTCAAGGCATAGCCCTTATCCCATAA 1062 0.4162 MKINRKVVFVLFAFVLFVVRGNAQDTLVPAIMTFGDSAVDVGNNDYLPTIFKANYPPYGRDFLNHKPTGRFCNGKLATDITADTLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSLQLNYFKEYQGKLAKVAGSKKAASIIKDALYLLSAGSSDFVQNYYTNPLINKLVTPDQYSSYLVKSFSSFVKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHENGCVSRINNDAQGFNKKINSAAKNLQKQLPGLKIVVFDIYKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQVLADTLIVQGIALIP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273236g00001 353 Pfam GDSL-like Lipase/Acylhydrolase 31 342 IPR001087 GO:0016788
Stsc273236g00001 353 PANTHER GDSL ESTERASE/LIPASE EXL3 12 344 - -
Stsc273236g00001 353 Gene3D SGNH hydrolase 19 348 IPR036514 -
Stsc273236g00001 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Stsc273236g00001 353 FunFam GDSL esterase/lipase APG 20 349 - -
Stsc273236g00001 353 SUPERFAMILY SGNH hydrolase 32 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273236g00001 Stsc-Chr273236 7426 9141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273236g00001 6 345 Pollen Coat Proteome AT1G75910 34.985 2.35e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273236g00001 - - gmx:100795716 629.017