Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273205g00002 ATGGCTGAAAAACTTTATGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTATTTTAGACATCGTGTCTAAAATACTTGAAGATGACACTGTCCTCAATGGAAACTACTCTGCTTTGGAGTTGCTTCAAAGGTTGGAGAAATGTCTGTTTGATGTTGGACCTGTTCTTGATGATGCTGAGCTGAAACAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGCTGATCTCCAAGATGCTCTCTATTCTGCTGATGACTTCCTCGATGAACTCTTCACTAAAGCTGCCACTGCCACTCAAACAAATCCAGGTATCTCTGCTTTATGTTCTTGTGTTGTTGATTCATATATTGAAGATTATGGGGACATGGAAAGAATAGTTAGAAGAGTAGAGTCTGTTGTAGCACGCAAAACTTATCTTCGTTTGAAGGAGAGTGCCAAGGTGGACATGTCATGGAGAATTCCATCCACATCTCTGGTTGAACCATCGGAGATATGTGGCAGGGAAGAAGACAAGGAGGCCATATTGAAACTGATGCTAGATGATCATGATGCTGATTTATCTGTGATTCCGATTGTTGGCATGGGTGGGATAGGAAAGACCACCTTGGCTCAATTGGTTTACCACGATGACAAAGTGAAGGAGAAGTTTGATTTTCGAGGTTGGGTTTGTGTGTCTGAAGAGTTTGATGTTGTCAAGGTCACCAAGACGATAATCGAGGCAGTAACTTCGAGTCATTGTAACTTGACGGACTTGAATTTACTTCAACATGATCTGAAAGGAAAGTTGTCTAGGAAAAAGTTCTTTGTTGTCTTGGACGATGTCTGGAATGAAAACTATGATGATTGGAATATGCTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTCTCGTAACTACTAGAAGTAAAAAGGTGGCTTCTGTGGTCCAAACTGTTTCACCTCATGAATTAAGTTCTTTGTCTGATGAAGATTGTTGGTTGGTGTTCTCAAAATATGCACGTCTTTCAACTATTTCCATGGAGAATCCAACCCTGGAAAAAATTGGCAGAGATATTGTAAAGAAGTGTTGTGGATTGCCCTTGGCAGCTCAAGCTCTTGGAGGCTTAGTGCGTGGAAATTCTGATGTCAAGTATTGGAATCATTTGCTGAAGAGTGAGATCTGGGAACTCTCTGATAATAGAATAAATGTTGTTCCAGCGTTGAGAATAAGTTATTATTTTCTGCCTTCATATTTGAAGCGGTGCTTTGTTTATTGTTCCTTGTATCCCAAGGACTATGAATTTAGCAAAGATGAGTTGATATTGTTATGGATGGCAGAGAATTTTTTGCAACCAGAAGGAAAAAAGACTATGGAAGACGTTGGTGATGAGTATTTTGATGAATTACTTGCGAGATCATTTTTCCAACCACATAGTACTCGCAAAGAGACATTTGTGATGCATGATCTTGTGCATGATTTGGCAATGATCTTTGCTGGAGAATTCTATTATCGAGCTGAAGATCTTGAGAAGGCTGATGAGGTTGATAGTAAAACTCATCATTTGTCACATAATGCCAAAGGCAATTATCCAATGTCAAAACTTTTGGCAGTTTGTGACAGAGTGAAAGATACTAGGACATTTCTTGAAATCAATCTGCAGCAGTGGATTCCATTCAATATGGAAAACGCACCGTGTATCTTGTTGTCAAAGTTATTGCAGCTGAGAGCTTTGTCGTTCAAATCCTTTCCTCTTGAGTTACTACCGGATTCAATAGGTGGGCTGATTCATCTGCGCTACTTGGATCTGTCTCTTACCTACATCGTGACATTGCCAGAGTCATTGGGTGAGCTGTATAATTTGCAAACCTTGAAGCTGTTTCAATGCCAGAAACTAAAAAAGCTTCCAGATGGTTTGAAAGATCTTGTAAATTTACGCCATCTTGATATTAGAGGTACTAACTTGCATGAGATGCCGAAAGGCATGCACAAATTGAAAAACTTGCAGTTTTTGAGTGATTATGTTGTTGGGAAGCATGAAGAGAATAAGATTAAAGAATTGGGAGCACTTGCAGATCTACACAAATCAATTCACATTTCCAAATTGGAGAATATGGTCAATAGCAGTGAAGCTTTGGTTGCAAGAATGTGTGATAAGGATGGCATTGATTCTATGAGGTTGAGTTGGTCGTTGTATAAAGGCGAGAATATAGTTGACTCCCAAATAGAAGAAGATAATCTGGACAAGTTACGACCTCATAATAATTTGAAAGAACTGGAAATCAGTGGTTATAGGGGTACAAGATTTCCAGATTGGTTGGGACATTCTTCTTACCACAACATCACCAATATAAAACTAGAGTATGGTTTTAAGAATTGCCGTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCATCTCACAATTTTTGGATTTGAAAAGCTTGAGATTGTGGGTGCTGAGTTTTATCAGAACGGTGAATGTTGTTTGGAGATATCATTTCCAATGCTTGAAACTCTTTGGTTTCATTCAATGCATTACTGGAAGGAATGGCATTCATTGGAGGTCCATGCATTTCCTCGACTTAAGAAGCTTACCATACGGGAGTGTCCCATGTTGAGAGGAGATCTTCCCAATCAACTACCATCTTTGCAATCACTTGAGATTAAGAATTGCGAGCAGCTCAGTTATAGTCTTCCAAGAGCTCCTGCCATGACATCTTTAATCATAAGGGGTAGCAATGAAGTGAGAATTGGGGAGCTACCTCCTTTATTGCGTGATCTATCAATTGGAGGAAAGCATCAAGTGGAGTATGTGTTAGAGACCATTACCAACACGCAACTGACTTGTCTCACGTCTTTATGCATATCGAATTATCCATCCCACATATCGTTTCCGGTGAGTAGTATTCCCGCATCACTACAAATGTTGCAGATATCGGATTGCAGAAAATTACAAGTCCAAATGGATGGGCAACATCACTCTCTGCAGAAACTATTTATAAATAACAGCTGTGACTCAGATAAATCCTTCTCGTTGTTGGATTCCTTTCCTAATCTCAAGAGTGTTGACATCTGGGACTGTGAAAAGATGGAGTGTATTGTGGTGTCACGTTCTCTTTCGTGTCTCCGTTCTTTATATATCTTATATTGTGGGAGCTTCAAATCCATATCGACGCTATGGATGGCAGCACCTCAGCTACAAGATCTAAGAATAAGGGGTTGCAGAGAGATGGATATGTCTGCTACAGGGGACCCACAGTGTAGCCTGAGATCTCTTACAATCTCCTACTGCGAGAAACTGGCCAGCTCGGCACCATTCATGAATCCGCAATTTCATGGGCTTACTTATCTTATGATTTGTGGTGAAGACGACGAGAGTGTCAAGTGTCTCCCAAAGGAAGGTTGGTTGCCTGCCTCACTTGAGTCTCTTGCACTGAATCGCATGAAAAGTGTGGAGACGCTGGAATGCAAGGGACTTGCACACCTGACCTCCCTCCAACGATTATCTATATATGATTGTGACAAGTTGGAAAATATCGAGGGAGAAAAGCTACCAGCCTCTCTAATACGGCTCACTATCTCTCATACTCCTTTGCTGGCTAAACGGTGCGAGATGAAGGACCCACAAATTTGGCCCAAAATTTCCCACATCAAAGGCATTCAAGTTAATCTCACATGGATTTGCTAA 3678 0.4059 MAEKLYGGAYLSSFVDAILDIVSKILEDDTVLNGNYSALELLQRLEKCLFDVGPVLDDAELKQFTDKRVKKWLADLQDALYSADDFLDELFTKAATATQTNPGISALCSCVVDSYIEDYGDMERIVRRVESVVARKTYLRLKESAKVDMSWRIPSTSLVEPSEICGREEDKEAILKLMLDDHDADLSVIPIVGMGGIGKTTLAQLVYHDDKVKEKFDFRGWVCVSEEFDVVKVTKTIIEAVTSSHCNLTDLNLLQHDLKGKLSRKKFFVVLDDVWNENYDDWNMLLKPFQKGVKGSKILVTTRSKKVASVVQTVSPHELSSLSDEDCWLVFSKYARLSTISMENPTLEKIGRDIVKKCCGLPLAAQALGGLVRGNSDVKYWNHLLKSEIWELSDNRINVVPALRISYYFLPSYLKRCFVYCSLYPKDYEFSKDELILLWMAENFLQPEGKKTMEDVGDEYFDELLARSFFQPHSTRKETFVMHDLVHDLAMIFAGEFYYRAEDLEKADEVDSKTHHLSHNAKGNYPMSKLLAVCDRVKDTRTFLEINLQQWIPFNMENAPCILLSKLLQLRALSFKSFPLELLPDSIGGLIHLRYLDLSLTYIVTLPESLGELYNLQTLKLFQCQKLKKLPDGLKDLVNLRHLDIRGTNLHEMPKGMHKLKNLQFLSDYVVGKHEENKIKELGALADLHKSIHISKLENMVNSSEALVARMCDKDGIDSMRLSWSLYKGENIVDSQIEEDNLDKLRPHNNLKELEISGYRGTRFPDWLGHSSYHNITNIKLEYGFKNCRMLPSLGQLPSLKHLTIFGFEKLEIVGAEFYQNGECCLEISFPMLETLWFHSMHYWKEWHSLEVHAFPRLKKLTIRECPMLRGDLPNQLPSLQSLEIKNCEQLSYSLPRAPAMTSLIIRGSNEVRIGELPPLLRDLSIGGKHQVEYVLETITNTQLTCLTSLCISNYPSHISFPVSSIPASLQMLQISDCRKLQVQMDGQHHSLQKLFINNSCDSDKSFSLLDSFPNLKSVDIWDCEKMECIVVSRSLSCLRSLYILYCGSFKSISTLWMAAPQLQDLRIRGCREMDMSATGDPQCSLRSLTISYCEKLASSAPFMNPQFHGLTYLMICGEDDESVKCLPKEGWLPASLESLALNRMKSVETLECKGLAHLTSLQRLSIYDCDKLENIEGEKLPASLIRLTISHTPLLAKRCEMKDPQIWPKISHIKGIQVNLTWIC 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273205g00002 1225 SUPERFAMILY L domain-like 901 1212 - -
Stsc273205g00002 1225 Gene3D Ribonuclease Inhibitor 717 900 IPR032675 -
Stsc273205g00002 1225 FunFam Probable disease resistance protein At1g61300 151 315 - -
Stsc273205g00002 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 421 IPR027417 -
Stsc273205g00002 1225 PRINTS Disease resistance protein signature 188 203 - -
Stsc273205g00002 1225 PRINTS Disease resistance protein signature 261 275 - -
Stsc273205g00002 1225 PRINTS Disease resistance protein signature 875 891 - -
Stsc273205g00002 1225 PRINTS Disease resistance protein signature 358 372 - -
Stsc273205g00002 1225 FunFam Probable disease resistance protein At1g63360 407 492 - -
Stsc273205g00002 1225 Gene3D - 406 491 IPR036388 -
Stsc273205g00002 1225 Pfam NB-ARC domain 167 386 IPR002182 GO:0043531
Stsc273205g00002 1225 Pfam Rx N-terminal domain 38 97 IPR041118 -
Stsc273205g00002 1225 PANTHER DISEASE RESISTANCE PROTEIN RP 71 889 IPR044974 GO:0006952
Stsc273205g00002 1225 Gene3D - 321 405 IPR042197 -
Stsc273205g00002 1225 Gene3D - 16 119 - -
Stsc273205g00002 1225 SUPERFAMILY L domain-like 549 960 - -
Stsc273205g00002 1225 Gene3D - 148 315 IPR027417 -
Stsc273205g00002 1225 Gene3D Ribonuclease Inhibitor 539 708 IPR032675 -
Stsc273205g00002 1225 Gene3D Ribonuclease Inhibitor 984 1080 IPR032675 -
Stsc273205g00002 1225 Gene3D Ribonuclease Inhibitor 1081 1202 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273205g00002 Stsc-Chr273205 7266 11351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273205g00002 178 654 WRKY Transcription Factor Family AT5G45050 22.308 1.33e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273205g00002 - - aip:107626318 1762.27