Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273157g00001 TACATGTGTGACGTTGAAGAAGAATATGTCCCCAAGGTTGGAATGACTTTTGAAACAGTTGTTGAAGCTGGTTTGTTTTATAAAGAGTATGTGAAACATGCAGGCTTCTTTACAAAGATAAGGAACTCAAATAGGTGTAAGGAGACCAAGAAAGTAAAGAATCAACTAATAACTTGCAATAGAGAAGGGAGATGGAGATCTGAAGTACCATCTGTAGAAAAAACGAACCCGATATGTGGTGCAAATTGTCCTGCACGAATTTATGTGCACGTAGACAAGAAGACTCAACTTTGGTGTATTTCCAAGGTTGTTCTCCATCATTCACATCCATGA 333 0.3814 YMCDVEEEYVPKVGMTFETVVEAGLFYKEYVKHAGFFTKIRNSNRCKETKKVKNQLITCNREGRWRSEVPSVEKTNPICGANCPARIYVHVDKKTQLWCISKVVLHHSHP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273157g00001 110 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 110 - -
Stsc273157g00001 110 Pfam FAR1 DNA-binding domain 26 110 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273157g00001 Stsc-Chr273157 852 1184 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc273157g00001 FAR1 1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273157g00001 - K17604 aip:110271906 144.821