Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273145g00004 ATGAAGGATGGTCACTTTCTTAAGACAAGCTATGGAAGCCCTAACTATGCTGCTCCAGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTCTCTATGCCCTTCTTTGTGACACCCTTCCTTTTGATGATGTAAACATTCCAAATCTCTTCAAGAAAATTAAG 192 0.4062 MKDGHFLKTSYGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCDTLPFDDVNIPNLFKKIK 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273145g00004 64 Gene3D Transferase(Phosphotransferase) domain 1 1 64 - -
Stsc273145g00004 64 ProSiteProfiles Protein kinase domain profile. 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc273145g00004 64 SUPERFAMILY Protein kinase-like (PK-like) 5 63 IPR011009 -
Stsc273145g00004 64 PANTHER SERINE/THREONINE KINASE 6 63 - -
Stsc273145g00004 64 Pfam Protein kinase domain 4 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273145g00004 Stsc-Chr273145 10546 10859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273145g00004 1 63 CBL-interacting serine-threonine protein kinases AT2G26980 55.556 1.25e-20 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Stsc273145g00004 Pkinase 6.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273145g00004 K07198 - aof:109848236 128.642